Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP50Q70EL3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP50Q70EL3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP50Q70EL3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
USP50Q70EL3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP50Q70EL3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP50Q70EL3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
USP50Q70EL3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.68■■□□□ 1.06
USP50Q70EL3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP50Q70EL3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP50Q70EL3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP50Q70EL3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP50Q70EL3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.68■■□□□ 1.06
USP50Q70EL3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
USP50Q70EL3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP50Q70EL3 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.68■■□□□ 1.06
USP50Q70EL3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP50Q70EL3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP50Q70EL3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.68■■□□□ 1.06
USP50Q70EL3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.68■■□□□ 1.06
USP50Q70EL3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.68■■□□□ 1.06
USP50Q70EL3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
USP50Q70EL3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
USP50Q70EL3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.68■■□□□ 1.06
USP50Q70EL3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.68■■□□□ 1.06
USP50Q70EL3 AC064836.3-201ENST00000607928 673 ntBASIC21.68■■□□□ 1.06
USP50Q70EL3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP50Q70EL3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.68■■□□□ 1.06
USP50Q70EL3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP50Q70EL3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP50Q70EL3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.68■■□□□ 1.06
USP50Q70EL3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.68■■□□□ 1.06
USP50Q70EL3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP50Q70EL3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP50Q70EL3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.68■■□□□ 1.06
USP50Q70EL3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP50Q70EL3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
USP50Q70EL3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
USP50Q70EL3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
USP50Q70EL3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
USP50Q70EL3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP50Q70EL3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.67■■□□□ 1.06
USP50Q70EL3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.67■■□□□ 1.06
USP50Q70EL3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP50Q70EL3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.67■■□□□ 1.06
USP50Q70EL3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP50Q70EL3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP50Q70EL3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP50Q70EL3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP50Q70EL3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP50Q70EL3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
USP50Q70EL3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.67■■□□□ 1.06
USP50Q70EL3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP50Q70EL3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.67■■□□□ 1.06
USP50Q70EL3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.67■■□□□ 1.06
USP50Q70EL3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC21.67■■□□□ 1.06
USP50Q70EL3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP50Q70EL3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.67■■□□□ 1.06
USP50Q70EL3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.67■■□□□ 1.06
USP50Q70EL3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.67■■□□□ 1.06
USP50Q70EL3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
USP50Q70EL3 AC092364.2-202ENST00000597012 1073 ntBASIC21.67■■□□□ 1.06
USP50Q70EL3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.67■■□□□ 1.06
USP50Q70EL3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP50Q70EL3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
USP50Q70EL3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.67■■□□□ 1.06
USP50Q70EL3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.67■■□□□ 1.06
USP50Q70EL3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.67■■□□□ 1.06
USP50Q70EL3 HEIH-201ENST00000623091 1652 ntBASIC21.66■■□□□ 1.06
USP50Q70EL3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP50Q70EL3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
USP50Q70EL3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.66■■□□□ 1.06
USP50Q70EL3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
USP50Q70EL3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP50Q70EL3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP50Q70EL3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP50Q70EL3 AC254562.1-201ENST00000417586 456 ntBASIC21.66■■□□□ 1.06
USP50Q70EL3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.66■■□□□ 1.06
USP50Q70EL3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.66■■□□□ 1.06
USP50Q70EL3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
USP50Q70EL3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
USP50Q70EL3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.66■■□□□ 1.06
USP50Q70EL3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP50Q70EL3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP50Q70EL3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
USP50Q70EL3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP50Q70EL3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.65■■□□□ 1.06
USP50Q70EL3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP50Q70EL3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP50Q70EL3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
USP50Q70EL3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
USP50Q70EL3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
USP50Q70EL3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP50Q70EL3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
USP50Q70EL3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.65■■□□□ 1.06
USP50Q70EL3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
USP50Q70EL3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.65■■□□□ 1.06
USP50Q70EL3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.65■■□□□ 1.06
USP50Q70EL3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.65■■□□□ 1.06
USP50Q70EL3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms