Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS13CQ709C8 MIR3180-4-201ENST00000582223 153 ntBASIC15.34■□□□□ 0.05
VPS13CQ709C8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.34■□□□□ 0.05
VPS13CQ709C8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.34■□□□□ 0.05
VPS13CQ709C8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS13CQ709C8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VPS13CQ709C8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
VPS13CQ709C8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
VPS13CQ709C8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS13CQ709C8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
VPS13CQ709C8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS13CQ709C8 MIR3687-2-201ENST00000577708 61 ntBASIC15.34■□□□□ 0.05
VPS13CQ709C8 MIR3687-1-201ENST00000614492 61 ntBASIC15.34■□□□□ 0.05
VPS13CQ709C8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.34■□□□□ 0.05
VPS13CQ709C8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
VPS13CQ709C8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.34■□□□□ 0.05
VPS13CQ709C8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS13CQ709C8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS13CQ709C8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VPS13CQ709C8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VPS13CQ709C8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
VPS13CQ709C8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.05
VPS13CQ709C8 AL591424.1-201ENST00000442569 1213 ntBASIC15.33■□□□□ 0.05
VPS13CQ709C8 AP006288.1-201ENST00000446065 395 ntBASIC15.33■□□□□ 0.05
VPS13CQ709C8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.33■□□□□ 0.05
VPS13CQ709C8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
VPS13CQ709C8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VPS13CQ709C8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.33■□□□□ 0.05
VPS13CQ709C8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13CQ709C8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13CQ709C8 YBX2P1-201ENST00000394192 760 ntBASIC15.33■□□□□ 0.04
VPS13CQ709C8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.33■□□□□ 0.04
VPS13CQ709C8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.33■□□□□ 0.04
VPS13CQ709C8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13CQ709C8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.33■□□□□ 0.04
VPS13CQ709C8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
VPS13CQ709C8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.33■□□□□ 0.04
VPS13CQ709C8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.33■□□□□ 0.04
VPS13CQ709C8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13CQ709C8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13CQ709C8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13CQ709C8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13CQ709C8 RPS2P1-201ENST00000434010 821 ntBASIC15.33■□□□□ 0.04
VPS13CQ709C8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.33■□□□□ 0.04
VPS13CQ709C8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.33■□□□□ 0.04
VPS13CQ709C8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.33■□□□□ 0.04
VPS13CQ709C8 AC093484.2-201ENST00000580996 2166 ntBASIC15.33■□□□□ 0.04
VPS13CQ709C8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13CQ709C8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.33■□□□□ 0.04
VPS13CQ709C8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13CQ709C8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS13CQ709C8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.32■□□□□ 0.04
VPS13CQ709C8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13CQ709C8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13CQ709C8 INTS4P1-201ENST00000438455 1935 ntBASIC15.32■□□□□ 0.04
VPS13CQ709C8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 AC093909.1-201ENST00000504731 1122 ntBASIC15.32■□□□□ 0.04
VPS13CQ709C8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13CQ709C8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13CQ709C8 AL138831.2-201ENST00000606564 490 ntBASIC15.32■□□□□ 0.04
VPS13CQ709C8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13CQ709C8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13CQ709C8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13CQ709C8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 KRT18P27-201ENST00000427733 1299 ntBASIC15.32■□□□□ 0.04
VPS13CQ709C8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13CQ709C8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13CQ709C8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13CQ709C8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13CQ709C8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13CQ709C8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VPS13CQ709C8 SCARNA2-201ENST00000458748 420 ntBASIC15.32■□□□□ 0.04
VPS13CQ709C8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 LINC01711-201ENST00000598340 967 ntBASIC15.32■□□□□ 0.04
VPS13CQ709C8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 CLDN5-201ENST00000403084 2357 ntBASIC15.32■□□□□ 0.04
VPS13CQ709C8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VPS13CQ709C8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.31■□□□□ 0.04
VPS13CQ709C8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS13CQ709C8 AC011840.4-201ENST00000578471 627 ntBASIC15.31■□□□□ 0.04
VPS13CQ709C8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS13CQ709C8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS13CQ709C8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VPS13CQ709C8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VPS13CQ709C8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms