Protein–RNA interactions for Protein: Q6UWE0

LRSAM1, E3 ubiquitin-protein ligase LRSAM1, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRSAM1Q6UWE0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LRSAM1Q6UWE0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRSAM1Q6UWE0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LRSAM1Q6UWE0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRSAM1Q6UWE0 PPP1R14BP2-201ENST00000426284 444 ntBASIC21■□□□□ 0.95
LRSAM1Q6UWE0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21■□□□□ 0.95
LRSAM1Q6UWE0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21■□□□□ 0.95
LRSAM1Q6UWE0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21■□□□□ 0.95
LRSAM1Q6UWE0 AP006294.2-201ENST00000641667 209 ntBASIC21■□□□□ 0.95
LRSAM1Q6UWE0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
LRSAM1Q6UWE0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21■□□□□ 0.95
LRSAM1Q6UWE0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRSAM1Q6UWE0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
LRSAM1Q6UWE0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LRSAM1Q6UWE0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRSAM1Q6UWE0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LRSAM1Q6UWE0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 MYLKP1-201ENST00000509077 1580 ntBASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 KRT18P29-201ENST00000397031 1267 ntBASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 AL121829.2-201ENST00000620908 328 ntBASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 ITM2C-210ENST00000620962 501 ntBASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 NKILA-202ENST00000614771 2598 ntBASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRSAM1Q6UWE0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 AC097658.1-201ENST00000475555 843 ntBASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRSAM1Q6UWE0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LRSAM1Q6UWE0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms