Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 FAM197Y1-201ENST00000421178 764 ntBASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 ANO7L1-203ENST00000602586 1720 ntBASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 AC011676.5-201ENST00000624864 2660 ntBASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
FOXR1Q6PIV2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 TMPOP1-202ENST00000424642 1267 ntBASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 AF186192.3-201ENST00000583427 947 ntBASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 CD177P1-201ENST00000606252 935 ntBASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 NKILA-202ENST00000614771 2598 ntBASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXR1Q6PIV2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 NBPF21P-201ENST00000425093 1451 ntBASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 MMP23A-201ENST00000234610 1017 ntBASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 AP001271.2-201ENST00000624018 1556 ntBASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXR1Q6PIV2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXR1Q6PIV2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms