Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 RNF126P1-202ENST00000569893 925 ntBASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 AL049812.1-201ENST00000432563 2267 ntBASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.04■□□□□ 0.32
H3F3CQ6NXT2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 TSPY22P-201ENST00000427496 604 ntBASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 AP002383.4-201ENST00000442518 975 ntBASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 MIR3180-1-201ENST00000580374 94 ntBASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 MIR3180-3-201ENST00000584616 94 ntBASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
H3F3CQ6NXT2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 AL163051.1-201ENST00000569214 1512 ntBASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 CHCHD2P8-201ENST00000429873 447 ntBASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 KRT126P-201ENST00000549467 1181 ntBASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
H3F3CQ6NXT2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
H3F3CQ6NXT2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
H3F3CQ6NXT2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H3F3CQ6NXT2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H3F3CQ6NXT2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H3F3CQ6NXT2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
H3F3CQ6NXT2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.02■□□□□ 0.31
H3F3CQ6NXT2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
H3F3CQ6NXT2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H3F3CQ6NXT2 AC116562.4-201ENST00000641316 2276 ntBASIC17.01■□□□□ 0.31
H3F3CQ6NXT2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
H3F3CQ6NXT2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.01■□□□□ 0.31
H3F3CQ6NXT2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H3F3CQ6NXT2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
H3F3CQ6NXT2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.01■□□□□ 0.31
H3F3CQ6NXT2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
H3F3CQ6NXT2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
H3F3CQ6NXT2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.01■□□□□ 0.31
H3F3CQ6NXT2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
H3F3CQ6NXT2 KRT89P-201ENST00000620027 1478 ntBASIC17.01■□□□□ 0.31
H3F3CQ6NXT2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H3F3CQ6NXT2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
H3F3CQ6NXT2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.01■□□□□ 0.31
H3F3CQ6NXT2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms