Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 AP002414.4-201ENST00000589764 1148 ntBASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 GPR32P1-201ENST00000601788 811 ntBASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SWSAP1Q6NVH7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 CROCCP3-202ENST00000420820 1947 ntBASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 KRT18P1-202ENST00000452408 1331 ntBASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SWSAP1Q6NVH7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 KRT89P-201ENST00000620027 1478 ntBASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.48■□□□□ 0.87
SWSAP1Q6NVH7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 CLEC4GP1-201ENST00000596555 870 ntBASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SWSAP1Q6NVH7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms