Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC144NLQ6NUI1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC144NLQ6NUI1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CCDC144NLQ6NUI1 AC073508.3-201ENST00000619697 1419 ntBASIC14.98□□□□□ -0.01
CCDC144NLQ6NUI1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC144NLQ6NUI1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC144NLQ6NUI1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC144NLQ6NUI1 AC098818.2-201ENST00000564925 2320 ntBASIC14.98□□□□□ -0.01
CCDC144NLQ6NUI1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 TMPOP1-202ENST00000424642 1267 ntBASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 KRT18P57-201ENST00000443599 1254 ntBASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 AC104390.1-201ENST00000555663 520 ntBASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 MYLKP1-201ENST00000509077 1580 ntBASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC144NLQ6NUI1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC144NLQ6NUI1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC144NLQ6NUI1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CCDC144NLQ6NUI1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC144NLQ6NUI1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.96□□□□□ -0.02
CCDC144NLQ6NUI1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 RNF152P1-201ENST00000397754 604 ntBASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 HOMER2P1-201ENST00000455653 964 ntBASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 AC092647.4-201ENST00000457211 535 ntBASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 AC024243.1-201ENST00000609234 778 ntBASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC144NLQ6NUI1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms