Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 MIR149-201ENST00000384879 89 ntBASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP4R3AQ6IN85 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 RASA4DP-201ENST00000460726 1199 ntBASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 AL157888.1-201ENST00000631930 593 ntBASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 AC120498.9-201ENST00000339021 3867 ntBASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PPP4R3AQ6IN85 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 SDHAP2-201ENST00000455183 2001 ntBASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PPP4R3AQ6IN85 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PPP4R3AQ6IN85 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms