Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AL109659.2-201ENST00000606809 1674 ntBASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL13A1Q5TAT6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.62■□□□□ 0.89
COL13A1Q5TAT6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL13A1Q5TAT6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL13A1Q5TAT6 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC20.62■□□□□ 0.89
COL13A1Q5TAT6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.62■□□□□ 0.89
COL13A1Q5TAT6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.62■□□□□ 0.89
COL13A1Q5TAT6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.62■□□□□ 0.89
COL13A1Q5TAT6 AC068472.1-201ENST00000474589 881 ntBASIC20.62■□□□□ 0.89
COL13A1Q5TAT6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL13A1Q5TAT6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.62■□□□□ 0.89
COL13A1Q5TAT6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.62■□□□□ 0.89
COL13A1Q5TAT6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.62■□□□□ 0.89
COL13A1Q5TAT6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.62■□□□□ 0.89
COL13A1Q5TAT6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL13A1Q5TAT6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
COL13A1Q5TAT6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 AC092933.1-201ENST00000393644 945 ntBASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 KLF2P3-201ENST00000451977 1087 ntBASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 AL512638.1-201ENST00000457493 794 ntBASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 AC003101.2-201ENST00000612557 442 ntBASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
COL13A1Q5TAT6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.6■□□□□ 0.89
COL13A1Q5TAT6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 MIR658-201ENST00000385210 100 ntBASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 AL627223.1-201ENST00000416693 442 ntBASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 MIR6805-201ENST00000615055 62 ntBASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 REXO1L3P-201ENST00000622202 1288 ntBASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 AC004790.2-201ENST00000623588 572 ntBASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.59■□□□□ 0.89
COL13A1Q5TAT6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 TREML5P-201ENST00000421694 576 ntBASIC20.58■□□□□ 0.89
COL13A1Q5TAT6 AC107890.1-201ENST00000422478 521 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms