Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRK2Q5S007 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRK2Q5S007 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRK2Q5S007 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRK2Q5S007 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRK2Q5S007 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRK2Q5S007 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRK2Q5S007 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRK2Q5S007 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LRRK2Q5S007 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRK2Q5S007 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRK2Q5S007 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRK2Q5S007 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRK2Q5S007 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRK2Q5S007 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRK2Q5S007 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRK2Q5S007 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRK2Q5S007 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRK2Q5S007 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRK2Q5S007 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRK2Q5S007 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRK2Q5S007 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRK2Q5S007 AC093214.1-201ENST00000511688 1107 ntBASIC15.93■□□□□ 0.14
LRRK2Q5S007 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRK2Q5S007 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRK2Q5S007 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRK2Q5S007 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 CEND1P1-201ENST00000451006 455 ntBASIC15.92■□□□□ 0.14
LRRK2Q5S007 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 RN7SL204P-201ENST00000582831 262 ntBASIC15.92■□□□□ 0.14
LRRK2Q5S007 AC011467.2-201ENST00000598425 242 ntBASIC15.92■□□□□ 0.14
LRRK2Q5S007 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 AL512408.1-201ENST00000569378 2000 ntBASIC15.92■□□□□ 0.14
LRRK2Q5S007 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 AC097374.2-201ENST00000618617 1306 ntBASIC15.92■□□□□ 0.14
LRRK2Q5S007 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 AL008721.1-201ENST00000609964 604 ntBASIC15.92■□□□□ 0.14
LRRK2Q5S007 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LRRK2Q5S007 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRK2Q5S007 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LRRK2Q5S007 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRK2Q5S007 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRK2Q5S007 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.91■□□□□ 0.14
LRRK2Q5S007 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.91■□□□□ 0.14
LRRK2Q5S007 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRK2Q5S007 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRK2Q5S007 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms