Protein–RNA interactions for Protein: Q5JSP0

FGD3, FYVE, RhoGEF and PH domain-containing protein 3, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD3Q5JSP0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
FGD3Q5JSP0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.34■□□□□ 0.37
FGD3Q5JSP0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.34■□□□□ 0.37
FGD3Q5JSP0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.34■□□□□ 0.37
FGD3Q5JSP0 AC004264.1-201ENST00000608354 794 ntBASIC17.34■□□□□ 0.37
FGD3Q5JSP0 AC134043.2-201ENST00000624206 2238 ntBASIC17.34■□□□□ 0.37
FGD3Q5JSP0 AC133041.1-202ENST00000642053 222 ntBASIC17.34■□□□□ 0.37
FGD3Q5JSP0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FGD3Q5JSP0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FGD3Q5JSP0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FGD3Q5JSP0 AC008894.3-201ENST00000624324 3103 ntBASIC17.34■□□□□ 0.37
FGD3Q5JSP0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FGD3Q5JSP0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FGD3Q5JSP0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
FGD3Q5JSP0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FGD3Q5JSP0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
FGD3Q5JSP0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.33■□□□□ 0.37
FGD3Q5JSP0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
FGD3Q5JSP0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.33■□□□□ 0.37
FGD3Q5JSP0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.37
FGD3Q5JSP0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.33■□□□□ 0.37
FGD3Q5JSP0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 AC069152.1-201ENST00000438030 544 ntBASIC17.33■□□□□ 0.36
FGD3Q5JSP0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FGD3Q5JSP0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 AL109923.1-201ENST00000618799 583 ntBASIC17.32■□□□□ 0.36
FGD3Q5JSP0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 HEIH-201ENST00000623091 1652 ntBASIC17.32■□□□□ 0.36
FGD3Q5JSP0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.32■□□□□ 0.36
FGD3Q5JSP0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
FGD3Q5JSP0 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.31■□□□□ 0.36
FGD3Q5JSP0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
FGD3Q5JSP0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FGD3Q5JSP0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FGD3Q5JSP0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.31■□□□□ 0.36
FGD3Q5JSP0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FGD3Q5JSP0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FGD3Q5JSP0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FGD3Q5JSP0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms