Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 AP000593.1-201ENST00000393668 712 ntBASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 ESRRAP1-201ENST00000400596 1257 ntBASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 AC011506.1-201ENST00000474329 610 ntBASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 CR392000.1-201ENST00000624770 1228 ntBASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RUNDC3AQ59EK9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 AL096828.2-201ENST00000567259 1965 ntBASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 AL353807.1-201ENST00000427475 662 ntBASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RUNDC3AQ59EK9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RUNDC3AQ59EK9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RUNDC3AQ59EK9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.41■□□□□ 0.38
RUNDC3AQ59EK9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RUNDC3AQ59EK9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RUNDC3AQ59EK9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RUNDC3AQ59EK9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RUNDC3AQ59EK9 GMCL1P1-201ENST00000463439 1581 ntBASIC17.41■□□□□ 0.38
RUNDC3AQ59EK9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
RUNDC3AQ59EK9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms