Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CACNA1EQ15878 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA1EQ15878 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA1EQ15878 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.92■□□□□ 0.46
CACNA1EQ15878 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA1EQ15878 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA1EQ15878 AP001160.2-201ENST00000596071 487 ntBASIC17.92■□□□□ 0.46
CACNA1EQ15878 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.92■□□□□ 0.46
CACNA1EQ15878 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CACNA1EQ15878 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA1EQ15878 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CACNA1EQ15878 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA1EQ15878 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.91■□□□□ 0.46
CACNA1EQ15878 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA1EQ15878 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA1EQ15878 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CACNA1EQ15878 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA1EQ15878 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.91■□□□□ 0.46
CACNA1EQ15878 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA1EQ15878 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.91■□□□□ 0.46
CACNA1EQ15878 AC027796.2-201ENST00000575326 344 ntBASIC17.91■□□□□ 0.46
CACNA1EQ15878 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNA1EQ15878 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.91■□□□□ 0.46
CACNA1EQ15878 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA1EQ15878 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNA1EQ15878 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA1EQ15878 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA1EQ15878 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA1EQ15878 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.91■□□□□ 0.46
CACNA1EQ15878 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.91■□□□□ 0.46
CACNA1EQ15878 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.91■□□□□ 0.46
CACNA1EQ15878 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CACNA1EQ15878 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CACNA1EQ15878 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNA1EQ15878 AL049840.3-201ENST00000602669 611 ntBASIC17.9■□□□□ 0.46
CACNA1EQ15878 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CACNA1EQ15878 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNA1EQ15878 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.9■□□□□ 0.46
CACNA1EQ15878 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CACNA1EQ15878 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.9■□□□□ 0.46
CACNA1EQ15878 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CACNA1EQ15878 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CACNA1EQ15878 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.9■□□□□ 0.46
CACNA1EQ15878 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.9■□□□□ 0.46
CACNA1EQ15878 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.9■□□□□ 0.46
CACNA1EQ15878 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CACNA1EQ15878 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.9■□□□□ 0.46
CACNA1EQ15878 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CACNA1EQ15878 PMS2P2-201ENST00000425039 1128 ntBASIC17.9■□□□□ 0.46
CACNA1EQ15878 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.9■□□□□ 0.46
CACNA1EQ15878 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.9■□□□□ 0.46
CACNA1EQ15878 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.9■□□□□ 0.46
CACNA1EQ15878 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.9■□□□□ 0.46
CACNA1EQ15878 AP001269.4-201ENST00000609611 512 ntBASIC17.9■□□□□ 0.46
CACNA1EQ15878 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.9■□□□□ 0.46
CACNA1EQ15878 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.9■□□□□ 0.46
CACNA1EQ15878 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CACNA1EQ15878 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CACNA1EQ15878 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.89■□□□□ 0.46
CACNA1EQ15878 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CACNA1EQ15878 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CACNA1EQ15878 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
CACNA1EQ15878 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.89■□□□□ 0.46
CACNA1EQ15878 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.89■□□□□ 0.46
CACNA1EQ15878 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.89■□□□□ 0.46
CACNA1EQ15878 MIR5100-201ENST00000579544 119 ntBASIC17.89■□□□□ 0.46
CACNA1EQ15878 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.89■□□□□ 0.46
CACNA1EQ15878 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CACNA1EQ15878 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.89■□□□□ 0.46
CACNA1EQ15878 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CACNA1EQ15878 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CACNA1EQ15878 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CACNA1EQ15878 AL024508.2-201ENST00000607749 1894 ntBASIC17.89■□□□□ 0.45
CACNA1EQ15878 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNA1EQ15878 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CACNA1EQ15878 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CACNA1EQ15878 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNA1EQ15878 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CACNA1EQ15878 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CACNA1EQ15878 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNA1EQ15878 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.89■□□□□ 0.45
CACNA1EQ15878 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.89■□□□□ 0.45
CACNA1EQ15878 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
CACNA1EQ15878 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNA1EQ15878 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNA1EQ15878 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNA1EQ15878 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CACNA1EQ15878 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CACNA1EQ15878 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1EQ15878 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1EQ15878 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.88■□□□□ 0.45
CACNA1EQ15878 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1EQ15878 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1EQ15878 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1EQ15878 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CACNA1EQ15878 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
CACNA1EQ15878 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.88■□□□□ 0.45
CACNA1EQ15878 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1EQ15878 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CACNA1EQ15878 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms