Protein–RNA interactions for Protein: Q15834

CCDC85B, Coiled-coil domain-containing protein 85B, humanhuman

Predicted RBP Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85BQ15834 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85BQ15834 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC85BQ15834 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85BQ15834 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85BQ15834 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85BQ15834 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85BQ15834 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85BQ15834 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 AL645939.2-201ENST00000427340 991 ntBASIC19.43■□□□□ 0.7
CCDC85BQ15834 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85BQ15834 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 UNC93B6-202ENST00000528242 690 ntBASIC19.43■□□□□ 0.7
CCDC85BQ15834 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85BQ15834 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85BQ15834 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85BQ15834 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85BQ15834 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85BQ15834 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85BQ15834 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85BQ15834 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC85BQ15834 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC85BQ15834 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC85BQ15834 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85BQ15834 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85BQ15834 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC85BQ15834 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC85BQ15834 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC85BQ15834 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85BQ15834 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85BQ15834 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85BQ15834 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC85BQ15834 MIR770-201ENST00000390219 98 ntBASIC19.42■□□□□ 0.7
CCDC85BQ15834 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC85BQ15834 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC85BQ15834 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC85BQ15834 AC005336.2-201ENST00000593183 939 ntBASIC19.42■□□□□ 0.7
CCDC85BQ15834 AC011467.4-201ENST00000594891 528 ntBASIC19.42■□□□□ 0.7
CCDC85BQ15834 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85BQ15834 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85BQ15834 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85BQ15834 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC85BQ15834 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85BQ15834 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC85BQ15834 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC85BQ15834 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85BQ15834 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC85BQ15834 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85BQ15834 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC85BQ15834 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85BQ15834 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85BQ15834 AC006333.2-201ENST00000607957 2099 ntBASIC19.4■□□□□ 0.7
CCDC85BQ15834 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC85BQ15834 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms