Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
HMGXB3Q12766 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
HMGXB3Q12766 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
HMGXB3Q12766 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
HMGXB3Q12766 AC009102.3-201ENST00000623118 1491 ntBASIC32.33■■■□□ 2.77
HMGXB3Q12766 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
HMGXB3Q12766 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
HMGXB3Q12766 HTR5BP-201ENST00000430851 1154 ntBASIC32.33■■■□□ 2.77
HMGXB3Q12766 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC32.33■■■□□ 2.77
HMGXB3Q12766 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC32.33■■■□□ 2.77
HMGXB3Q12766 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
HMGXB3Q12766 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC32.33■■■□□ 2.77
HMGXB3Q12766 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC32.33■■■□□ 2.77
HMGXB3Q12766 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC32.33■■■□□ 2.77
HMGXB3Q12766 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
HMGXB3Q12766 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
HMGXB3Q12766 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
HMGXB3Q12766 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
HMGXB3Q12766 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC32.32■■■□□ 2.76
HMGXB3Q12766 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC32.32■■■□□ 2.76
HMGXB3Q12766 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC32.32■■■□□ 2.76
HMGXB3Q12766 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC32.32■■■□□ 2.76
HMGXB3Q12766 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
HMGXB3Q12766 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC32.32■■■□□ 2.76
HMGXB3Q12766 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC32.32■■■□□ 2.76
HMGXB3Q12766 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
HMGXB3Q12766 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
HMGXB3Q12766 PALM-208ENST00000592155 2272 ntTSL 4 BASIC32.32■■■□□ 2.76
HMGXB3Q12766 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
HMGXB3Q12766 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
HMGXB3Q12766 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
HMGXB3Q12766 ATP6V0CP3-201ENST00000417255 467 ntBASIC32.31■■■□□ 2.76
HMGXB3Q12766 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC32.31■■■□□ 2.76
HMGXB3Q12766 MSRA-206ENST00000521209 814 ntTSL 3 BASIC32.31■■■□□ 2.76
HMGXB3Q12766 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC32.31■■■□□ 2.76
HMGXB3Q12766 SDCCAG3P1-201ENST00000589292 1150 ntBASIC32.31■■■□□ 2.76
HMGXB3Q12766 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
HMGXB3Q12766 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
HMGXB3Q12766 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
HMGXB3Q12766 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
HMGXB3Q12766 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
HMGXB3Q12766 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC32.31■■■□□ 2.76
HMGXB3Q12766 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
HMGXB3Q12766 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
HMGXB3Q12766 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
HMGXB3Q12766 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC32.31■■■□□ 2.76
HMGXB3Q12766 MIR4469-201ENST00000583919 79 ntBASIC32.31■■■□□ 2.76
HMGXB3Q12766 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
HMGXB3Q12766 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
HMGXB3Q12766 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
HMGXB3Q12766 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC32.3■■■□□ 2.76
HMGXB3Q12766 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
HMGXB3Q12766 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC32.3■■■□□ 2.76
HMGXB3Q12766 AC141586.3-201ENST00000562166 1838 ntBASIC32.3■■■□□ 2.76
HMGXB3Q12766 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
HMGXB3Q12766 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC32.3■■■□□ 2.76
HMGXB3Q12766 AC005829.1-201ENST00000570002 483 ntBASIC32.3■■■□□ 2.76
HMGXB3Q12766 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC32.3■■■□□ 2.76
HMGXB3Q12766 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC32.3■■■□□ 2.76
HMGXB3Q12766 AC006557.2-201ENST00000592985 1240 ntBASIC32.3■■■□□ 2.76
HMGXB3Q12766 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
HMGXB3Q12766 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
HMGXB3Q12766 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
HMGXB3Q12766 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
HMGXB3Q12766 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC32.29■■■□□ 2.76
HMGXB3Q12766 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
HMGXB3Q12766 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
HMGXB3Q12766 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
HMGXB3Q12766 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
HMGXB3Q12766 PGM5P2-202ENST00000637225 1043 ntBASIC32.29■■■□□ 2.76
HMGXB3Q12766 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
HMGXB3Q12766 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
HMGXB3Q12766 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC32.29■■■□□ 2.76
HMGXB3Q12766 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
HMGXB3Q12766 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
HMGXB3Q12766 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
HMGXB3Q12766 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
HMGXB3Q12766 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
HMGXB3Q12766 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
HMGXB3Q12766 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC32.28■■■□□ 2.76
HMGXB3Q12766 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
HMGXB3Q12766 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC32.28■■■□□ 2.76
HMGXB3Q12766 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
HMGXB3Q12766 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
HMGXB3Q12766 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC32.27■■■□□ 2.76
HMGXB3Q12766 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
HMGXB3Q12766 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
HMGXB3Q12766 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC32.27■■■□□ 2.76
HMGXB3Q12766 KRT18P2-201ENST00000447938 1258 ntBASIC32.27■■■□□ 2.76
HMGXB3Q12766 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC32.27■■■□□ 2.76
HMGXB3Q12766 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
HMGXB3Q12766 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC32.27■■■□□ 2.76
HMGXB3Q12766 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
HMGXB3Q12766 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC32.27■■■□□ 2.76
HMGXB3Q12766 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
HMGXB3Q12766 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
HMGXB3Q12766 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
HMGXB3Q12766 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC32.27■■■□□ 2.76
HMGXB3Q12766 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
HMGXB3Q12766 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms