Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX4Q06945 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX4Q06945 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX4Q06945 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.67■□□□□ 0.74
SOX4Q06945 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.67■□□□□ 0.74
SOX4Q06945 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOX4Q06945 LINC01126-201ENST00000623515 1646 ntBASIC19.67■□□□□ 0.74
SOX4Q06945 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOX4Q06945 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOX4Q06945 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SOX4Q06945 AL450487.1-201ENST00000426799 995 ntBASIC19.67■□□□□ 0.74
SOX4Q06945 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.67■□□□□ 0.74
SOX4Q06945 LINC00265-3P-201ENST00000447588 903 ntBASIC19.67■□□□□ 0.74
SOX4Q06945 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SOX4Q06945 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.67■□□□□ 0.74
SOX4Q06945 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SOX4Q06945 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.67■□□□□ 0.74
SOX4Q06945 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.67■□□□□ 0.74
SOX4Q06945 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.67■□□□□ 0.74
SOX4Q06945 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.67■□□□□ 0.74
SOX4Q06945 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.67■□□□□ 0.74
SOX4Q06945 AL592071.1-201ENST00000611956 408 ntBASIC19.67■□□□□ 0.74
SOX4Q06945 IGHV3-41-201ENST00000613121 348 ntBASIC19.67■□□□□ 0.74
SOX4Q06945 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SOX4Q06945 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.67■□□□□ 0.74
SOX4Q06945 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.67■□□□□ 0.74
SOX4Q06945 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOX4Q06945 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SOX4Q06945 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOX4Q06945 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOX4Q06945 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOX4Q06945 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SOX4Q06945 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.67■□□□□ 0.74
SOX4Q06945 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 AC126763.1-201ENST00000552015 2118 ntBASIC19.66■□□□□ 0.74
SOX4Q06945 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.66■□□□□ 0.74
SOX4Q06945 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SOX4Q06945 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.66■□□□□ 0.74
SOX4Q06945 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.66■□□□□ 0.74
SOX4Q06945 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.66■□□□□ 0.74
SOX4Q06945 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.66■□□□□ 0.74
SOX4Q06945 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.66■□□□□ 0.74
SOX4Q06945 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.66■□□□□ 0.74
SOX4Q06945 AC090616.6-201ENST00000582640 721 ntBASIC19.66■□□□□ 0.74
SOX4Q06945 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SOX4Q06945 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.66■□□□□ 0.74
SOX4Q06945 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.66■□□□□ 0.74
SOX4Q06945 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX4Q06945 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX4Q06945 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.65■□□□□ 0.74
SOX4Q06945 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.65■□□□□ 0.74
SOX4Q06945 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SOX4Q06945 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SOX4Q06945 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SOX4Q06945 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX4Q06945 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
SOX4Q06945 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.65■□□□□ 0.74
SOX4Q06945 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX4Q06945 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX4Q06945 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SOX4Q06945 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX4Q06945 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SOX4Q06945 AP000867.3-201ENST00000524675 377 ntBASIC19.65■□□□□ 0.74
SOX4Q06945 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.65■□□□□ 0.74
SOX4Q06945 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.65■□□□□ 0.74
SOX4Q06945 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SOX4Q06945 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.65■□□□□ 0.74
SOX4Q06945 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.65■□□□□ 0.74
SOX4Q06945 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SOX4Q06945 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SOX4Q06945 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX4Q06945 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.65■□□□□ 0.74
SOX4Q06945 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX4Q06945 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SOX4Q06945 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX4Q06945 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX4Q06945 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX4Q06945 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.65■□□□□ 0.74
SOX4Q06945 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.64■□□□□ 0.74
SOX4Q06945 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SOX4Q06945 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SOX4Q06945 AC098818.2-201ENST00000564925 2320 ntBASIC19.64■□□□□ 0.74
SOX4Q06945 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SOX4Q06945 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SOX4Q06945 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SOX4Q06945 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms