Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.69■□□□□ 0.9
TPM4P67936 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TPM4P67936 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.69■□□□□ 0.9
TPM4P67936 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TPM4P67936 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM4P67936 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TPM4P67936 POU5F1P3-201ENST00000428824 1078 ntBASIC20.69■□□□□ 0.9
TPM4P67936 UNC93B4-201ENST00000505679 747 ntBASIC20.69■□□□□ 0.9
TPM4P67936 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.69■□□□□ 0.9
TPM4P67936 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.69■□□□□ 0.9
TPM4P67936 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.69■□□□□ 0.9
TPM4P67936 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.69■□□□□ 0.9
TPM4P67936 AC083880.1-201ENST00000608266 535 ntBASIC20.69■□□□□ 0.9
TPM4P67936 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.69■□□□□ 0.9
TPM4P67936 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM4P67936 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TPM4P67936 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TPM4P67936 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TPM4P67936 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
TPM4P67936 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.69■□□□□ 0.9
TPM4P67936 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM4P67936 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
TPM4P67936 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.68■□□□□ 0.9
TPM4P67936 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM4P67936 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM4P67936 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.68■□□□□ 0.9
TPM4P67936 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TPM4P67936 LINC00896-202ENST00000609602 2128 ntBASIC20.68■□□□□ 0.9
TPM4P67936 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TPM4P67936 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.68■□□□□ 0.9
TPM4P67936 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TPM4P67936 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM4P67936 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM4P67936 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM4P67936 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.68■□□□□ 0.9
TPM4P67936 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TPM4P67936 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.68■□□□□ 0.9
TPM4P67936 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM4P67936 AL138781.1-201ENST00000566567 1274 ntBASIC20.68■□□□□ 0.9
TPM4P67936 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM4P67936 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TPM4P67936 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
TPM4P67936 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM4P67936 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM4P67936 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM4P67936 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TPM4P67936 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TPM4P67936 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM4P67936 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM4P67936 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.67■□□□□ 0.9
TPM4P67936 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM4P67936 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TPM4P67936 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TPM4P67936 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TPM4P67936 NFIC-211ENST00000641145 8399 ntBASIC20.67■□□□□ 0.9
TPM4P67936 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TPM4P67936 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.67■□□□□ 0.9
TPM4P67936 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.67■□□□□ 0.9
TPM4P67936 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM4P67936 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.67■□□□□ 0.9
TPM4P67936 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.67■□□□□ 0.9
TPM4P67936 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TPM4P67936 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.67■□□□□ 0.9
TPM4P67936 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.67■□□□□ 0.9
TPM4P67936 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.67■□□□□ 0.9
TPM4P67936 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.67■□□□□ 0.9
TPM4P67936 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TPM4P67936 KRT8P11-201ENST00000409686 1436 ntBASIC20.67■□□□□ 0.9
TPM4P67936 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TPM4P67936 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TPM4P67936 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM4P67936 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TPM4P67936 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM4P67936 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TPM4P67936 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM4P67936 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TPM4P67936 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.66■□□□□ 0.9
TPM4P67936 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM4P67936 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM4P67936 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TPM4P67936 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.66■□□□□ 0.9
TPM4P67936 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.66■□□□□ 0.9
TPM4P67936 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TPM4P67936 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.66■□□□□ 0.9
TPM4P67936 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TPM4P67936 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.66■□□□□ 0.9
TPM4P67936 NCF1B-203ENST00000435988 1254 ntBASIC20.66■□□□□ 0.9
TPM4P67936 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.66■□□□□ 0.9
TPM4P67936 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM4P67936 Z85996.1-201ENST00000494644 937 ntBASIC20.66■□□□□ 0.9
TPM4P67936 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.66■□□□□ 0.9
TPM4P67936 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.66■□□□□ 0.9
TPM4P67936 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.66■□□□□ 0.9
TPM4P67936 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TPM4P67936 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TPM4P67936 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.66■□□□□ 0.9
TPM4P67936 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TPM4P67936 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TPM4P67936 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.66■□□□□ 0.9
TPM4P67936 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms