Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
USP46P62068 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.37■□□□□ 0.69
USP46P62068 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.37■□□□□ 0.69
USP46P62068 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.37■□□□□ 0.69
USP46P62068 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.37■□□□□ 0.69
USP46P62068 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
USP46P62068 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.37■□□□□ 0.69
USP46P62068 KRT18P56-201ENST00000507275 550 ntBASIC19.37■□□□□ 0.69
USP46P62068 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.37■□□□□ 0.69
USP46P62068 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.37■□□□□ 0.69
USP46P62068 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.37■□□□□ 0.69
USP46P62068 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.37■□□□□ 0.69
USP46P62068 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.37■□□□□ 0.69
USP46P62068 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.37■□□□□ 0.69
USP46P62068 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.37■□□□□ 0.69
USP46P62068 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.37■□□□□ 0.69
USP46P62068 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP46P62068 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP46P62068 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP46P62068 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP46P62068 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP46P62068 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP46P62068 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP46P62068 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.36■□□□□ 0.69
USP46P62068 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
USP46P62068 AC016734.2-201ENST00000624325 1377 ntBASIC19.36■□□□□ 0.69
USP46P62068 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP46P62068 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
USP46P62068 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.36■□□□□ 0.69
USP46P62068 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
USP46P62068 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.36■□□□□ 0.69
USP46P62068 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.36■□□□□ 0.69
USP46P62068 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.36■□□□□ 0.69
USP46P62068 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
USP46P62068 NPAP1P7-201ENST00000613027 823 ntBASIC19.36■□□□□ 0.69
USP46P62068 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.36■□□□□ 0.69
USP46P62068 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
USP46P62068 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP46P62068 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.36■□□□□ 0.69
USP46P62068 AC005082.1-201ENST00000413042 2259 ntBASIC19.36■□□□□ 0.69
USP46P62068 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP46P62068 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
USP46P62068 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.36■□□□□ 0.69
USP46P62068 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP46P62068 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
USP46P62068 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.36■□□□□ 0.69
USP46P62068 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
USP46P62068 AL163051.1-201ENST00000569214 1512 ntBASIC19.35■□□□□ 0.69
USP46P62068 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP46P62068 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP46P62068 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP46P62068 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.35■□□□□ 0.69
USP46P62068 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP46P62068 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP46P62068 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.35■□□□□ 0.69
USP46P62068 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.35■□□□□ 0.69
USP46P62068 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP46P62068 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP46P62068 HCG4P8-203ENST00000443049 980 ntBASIC19.35■□□□□ 0.69
USP46P62068 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
USP46P62068 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP46P62068 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.35■□□□□ 0.69
USP46P62068 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.35■□□□□ 0.69
USP46P62068 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.35■□□□□ 0.69
USP46P62068 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.35■□□□□ 0.69
USP46P62068 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.35■□□□□ 0.69
USP46P62068 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP46P62068 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP46P62068 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP46P62068 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP46P62068 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
USP46P62068 AC093525.10-201ENST00000625130 1569 ntBASIC19.35■□□□□ 0.69
USP46P62068 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
USP46P62068 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.35■□□□□ 0.69
USP46P62068 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.35■□□□□ 0.69
USP46P62068 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP46P62068 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
USP46P62068 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
USP46P62068 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP46P62068 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.34■□□□□ 0.69
USP46P62068 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms