Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SRP54P61011 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRP54P61011 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRP54P61011 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRP54P61011 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.18■□□□□ 0.5
SRP54P61011 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.18■□□□□ 0.5
SRP54P61011 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.18■□□□□ 0.5
SRP54P61011 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.18■□□□□ 0.5
SRP54P61011 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.18■□□□□ 0.5
SRP54P61011 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.18■□□□□ 0.5
SRP54P61011 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SRP54P61011 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.18■□□□□ 0.5
SRP54P61011 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SRP54P61011 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SRP54P61011 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRP54P61011 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRP54P61011 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SRP54P61011 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SRP54P61011 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.18■□□□□ 0.5
SRP54P61011 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SRP54P61011 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRP54P61011 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SRP54P61011 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRP54P61011 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.17■□□□□ 0.5
SRP54P61011 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SRP54P61011 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.17■□□□□ 0.5
SRP54P61011 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.17■□□□□ 0.5
SRP54P61011 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SRP54P61011 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 TSPY22P-201ENST00000427496 604 ntBASIC18.17■□□□□ 0.5
SRP54P61011 KRT126P-201ENST00000549467 1181 ntBASIC18.17■□□□□ 0.5
SRP54P61011 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.17■□□□□ 0.5
SRP54P61011 RNF126P1-202ENST00000569893 925 ntBASIC18.17■□□□□ 0.5
SRP54P61011 CLEC4GP1-201ENST00000596555 870 ntBASIC18.17■□□□□ 0.5
SRP54P61011 AC092329.2-201ENST00000598402 547 ntBASIC18.17■□□□□ 0.5
SRP54P61011 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.17■□□□□ 0.5
SRP54P61011 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.17■□□□□ 0.5
SRP54P61011 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.17■□□□□ 0.5
SRP54P61011 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SRP54P61011 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.17■□□□□ 0.5
SRP54P61011 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 AC026471.1-201ENST00000564629 3026 ntBASIC18.17■□□□□ 0.5
SRP54P61011 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRP54P61011 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRP54P61011 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRP54P61011 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SRP54P61011 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP54P61011 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP54P61011 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRP54P61011 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.16■□□□□ 0.5
SRP54P61011 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP54P61011 AP000593.1-201ENST00000393668 712 ntBASIC18.16■□□□□ 0.5
SRP54P61011 KRT18P41-201ENST00000518924 1277 ntBASIC18.16■□□□□ 0.5
SRP54P61011 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.16■□□□□ 0.5
SRP54P61011 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.16■□□□□ 0.5
SRP54P61011 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.16■□□□□ 0.5
SRP54P61011 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.16■□□□□ 0.5
SRP54P61011 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SRP54P61011 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SRP54P61011 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SRP54P61011 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SRP54P61011 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRP54P61011 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.16■□□□□ 0.5
SRP54P61011 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP54P61011 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SRP54P61011 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP54P61011 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SRP54P61011 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SRP54P61011 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.16■□□□□ 0.5
SRP54P61011 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.16■□□□□ 0.5
SRP54P61011 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SRP54P61011 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRP54P61011 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SRP54P61011 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SRP54P61011 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.15■□□□□ 0.5
SRP54P61011 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms