Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.39■□□□□ 0.69
ERVFC1P60507 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ERVFC1P60507 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.38■□□□□ 0.69
ERVFC1P60507 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ERVFC1P60507 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ERVFC1P60507 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.38■□□□□ 0.69
ERVFC1P60507 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.38■□□□□ 0.69
ERVFC1P60507 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.38■□□□□ 0.69
ERVFC1P60507 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.38■□□□□ 0.69
ERVFC1P60507 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
ERVFC1P60507 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.38■□□□□ 0.69
ERVFC1P60507 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ERVFC1P60507 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.38■□□□□ 0.69
ERVFC1P60507 AC068472.1-201ENST00000474589 881 ntBASIC19.38■□□□□ 0.69
ERVFC1P60507 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.38■□□□□ 0.69
ERVFC1P60507 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.38■□□□□ 0.69
ERVFC1P60507 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 AC113404.2-201ENST00000507884 177 ntBASIC19.38■□□□□ 0.69
ERVFC1P60507 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.38■□□□□ 0.69
ERVFC1P60507 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.38■□□□□ 0.69
ERVFC1P60507 MTDHP3-201ENST00000594186 672 ntBASIC19.38■□□□□ 0.69
ERVFC1P60507 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ERVFC1P60507 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ERVFC1P60507 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERVFC1P60507 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ERVFC1P60507 AL032819.2-201ENST00000624543 2162 ntBASIC19.37■□□□□ 0.69
ERVFC1P60507 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.37■□□□□ 0.69
ERVFC1P60507 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERVFC1P60507 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.37■□□□□ 0.69
ERVFC1P60507 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERVFC1P60507 PMS2P7-201ENST00000506558 1336 ntBASIC19.37■□□□□ 0.69
ERVFC1P60507 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERVFC1P60507 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.37■□□□□ 0.69
ERVFC1P60507 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERVFC1P60507 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ERVFC1P60507 AC073648.2-201ENST00000510116 352 ntBASIC19.37■□□□□ 0.69
ERVFC1P60507 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.37■□□□□ 0.69
ERVFC1P60507 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ERVFC1P60507 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.37■□□□□ 0.69
ERVFC1P60507 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.37■□□□□ 0.69
ERVFC1P60507 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.37■□□□□ 0.69
ERVFC1P60507 TERC-201ENST00000602385 541 ntBASIC19.37■□□□□ 0.69
ERVFC1P60507 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.37■□□□□ 0.69
ERVFC1P60507 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.37■□□□□ 0.69
ERVFC1P60507 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.37■□□□□ 0.69
ERVFC1P60507 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ERVFC1P60507 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ERVFC1P60507 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.37■□□□□ 0.69
ERVFC1P60507 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERVFC1P60507 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.37■□□□□ 0.69
ERVFC1P60507 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ERVFC1P60507 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
ERVFC1P60507 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
ERVFC1P60507 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ERVFC1P60507 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERVFC1P60507 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.36■□□□□ 0.69
ERVFC1P60507 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ERVFC1P60507 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.36■□□□□ 0.69
ERVFC1P60507 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERVFC1P60507 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERVFC1P60507 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.36■□□□□ 0.69
ERVFC1P60507 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERVFC1P60507 MIR149-201ENST00000384879 89 ntBASIC19.36■□□□□ 0.69
ERVFC1P60507 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
ERVFC1P60507 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.36■□□□□ 0.69
ERVFC1P60507 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.36■□□□□ 0.69
ERVFC1P60507 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.36■□□□□ 0.69
ERVFC1P60507 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.36■□□□□ 0.69
ERVFC1P60507 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.36■□□□□ 0.69
ERVFC1P60507 AP001269.4-201ENST00000609611 512 ntBASIC19.36■□□□□ 0.69
ERVFC1P60507 AC116407.3-201ENST00000623905 1129 ntBASIC19.36■□□□□ 0.69
ERVFC1P60507 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ERVFC1P60507 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERVFC1P60507 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.36■□□□□ 0.69
ERVFC1P60507 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.36■□□□□ 0.69
ERVFC1P60507 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERVFC1P60507 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ERVFC1P60507 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.36■□□□□ 0.69
ERVFC1P60507 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERVFC1P60507 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ERVFC1P60507 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ERVFC1P60507 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ERVFC1P60507 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ERVFC1P60507 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ERVFC1P60507 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms