Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.85■□□□□ 0.13
AP3S2P59780 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
AP3S2P59780 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.85■□□□□ 0.13
AP3S2P59780 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
AP3S2P59780 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.85■□□□□ 0.13
AP3S2P59780 TUBB8P6-201ENST00000436895 1288 ntBASIC15.85■□□□□ 0.13
AP3S2P59780 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.85■□□□□ 0.13
AP3S2P59780 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
AP3S2P59780 AC142381.2-201ENST00000566120 298 ntBASIC15.85■□□□□ 0.13
AP3S2P59780 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.85■□□□□ 0.13
AP3S2P59780 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.85■□□□□ 0.13
AP3S2P59780 RAP2CP1-201ENST00000605103 478 ntBASIC15.85■□□□□ 0.13
AP3S2P59780 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.85■□□□□ 0.13
AP3S2P59780 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
AP3S2P59780 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
AP3S2P59780 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3S2P59780 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
AP3S2P59780 KRT8P45-201ENST00000414328 1447 ntBASIC15.85■□□□□ 0.13
AP3S2P59780 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
AP3S2P59780 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
AP3S2P59780 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
AP3S2P59780 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
AP3S2P59780 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.84■□□□□ 0.13
AP3S2P59780 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
AP3S2P59780 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.84■□□□□ 0.13
AP3S2P59780 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.84■□□□□ 0.13
AP3S2P59780 GPX1P1-201ENST00000388829 606 ntBASIC15.84■□□□□ 0.13
AP3S2P59780 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
AP3S2P59780 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.84■□□□□ 0.13
AP3S2P59780 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 KRT18P16-201ENST00000510337 1294 ntBASIC15.84■□□□□ 0.13
AP3S2P59780 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.84■□□□□ 0.13
AP3S2P59780 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.84■□□□□ 0.13
AP3S2P59780 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.84■□□□□ 0.13
AP3S2P59780 AC068587.9-201ENST00000641814 219 ntBASIC15.84■□□□□ 0.13
AP3S2P59780 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.84■□□□□ 0.13
AP3S2P59780 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.84■□□□□ 0.13
AP3S2P59780 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
AP3S2P59780 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3S2P59780 AC008556.1-201ENST00000610908 2040 ntBASIC15.84■□□□□ 0.13
AP3S2P59780 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.83■□□□□ 0.13
AP3S2P59780 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
AP3S2P59780 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
AP3S2P59780 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
AP3S2P59780 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
AP3S2P59780 AL121761.2-201ENST00000598007 1648 ntBASIC15.83■□□□□ 0.13
AP3S2P59780 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
AP3S2P59780 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
AP3S2P59780 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
AP3S2P59780 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
AP3S2P59780 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
AP3S2P59780 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
AP3S2P59780 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.83■□□□□ 0.12
AP3S2P59780 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S2P59780 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.83■□□□□ 0.12
AP3S2P59780 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.83■□□□□ 0.12
AP3S2P59780 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S2P59780 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S2P59780 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.83■□□□□ 0.12
AP3S2P59780 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S2P59780 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S2P59780 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.83■□□□□ 0.12
AP3S2P59780 AL121906.2-201ENST00000621597 723 ntBASIC15.83■□□□□ 0.12
AP3S2P59780 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
AP3S2P59780 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3S2P59780 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms