Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 TSPY14P-201ENST00000303979 915 ntBASIC16.5■□□□□ 0.23
CLRN1P58418 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLRN1P58418 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.5■□□□□ 0.23
CLRN1P58418 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.5■□□□□ 0.23
CLRN1P58418 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLRN1P58418 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
CLRN1P58418 AL596275.1-201ENST00000423464 877 ntBASIC16.5■□□□□ 0.23
CLRN1P58418 AC007663.1-201ENST00000438948 1240 ntBASIC16.5■□□□□ 0.23
CLRN1P58418 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CLRN1P58418 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.5■□□□□ 0.23
CLRN1P58418 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.5■□□□□ 0.23
CLRN1P58418 EGLN1P1-201ENST00000531623 762 ntBASIC16.5■□□□□ 0.23
CLRN1P58418 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.5■□□□□ 0.23
CLRN1P58418 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.5■□□□□ 0.23
CLRN1P58418 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.5■□□□□ 0.23
CLRN1P58418 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLRN1P58418 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.5■□□□□ 0.23
CLRN1P58418 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLRN1P58418 AC092338.2-201ENST00000568827 1415 ntBASIC16.5■□□□□ 0.23
CLRN1P58418 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLRN1P58418 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLRN1P58418 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLRN1P58418 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.5■□□□□ 0.23
CLRN1P58418 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLRN1P58418 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLRN1P58418 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLRN1P58418 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CLRN1P58418 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLRN1P58418 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLRN1P58418 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CLRN1P58418 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLRN1P58418 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CLRN1P58418 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CLRN1P58418 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CLRN1P58418 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLRN1P58418 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLRN1P58418 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLRN1P58418 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.49■□□□□ 0.23
CLRN1P58418 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLRN1P58418 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLRN1P58418 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.49■□□□□ 0.23
CLRN1P58418 KRT18P41-201ENST00000518924 1277 ntBASIC16.49■□□□□ 0.23
CLRN1P58418 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.49■□□□□ 0.23
CLRN1P58418 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.49■□□□□ 0.23
CLRN1P58418 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
CLRN1P58418 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLRN1P58418 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLRN1P58418 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLRN1P58418 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLRN1P58418 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CLRN1P58418 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLRN1P58418 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLRN1P58418 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLRN1P58418 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CLRN1P58418 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.49■□□□□ 0.23
CLRN1P58418 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLRN1P58418 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLRN1P58418 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLRN1P58418 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLRN1P58418 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.48■□□□□ 0.23
CLRN1P58418 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLRN1P58418 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLRN1P58418 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.48■□□□□ 0.23
CLRN1P58418 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLRN1P58418 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.48■□□□□ 0.23
CLRN1P58418 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.48■□□□□ 0.23
CLRN1P58418 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.48■□□□□ 0.23
CLRN1P58418 AC010653.2-201ENST00000623505 997 ntBASIC16.48■□□□□ 0.23
CLRN1P58418 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.48■□□□□ 0.23
CLRN1P58418 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLRN1P58418 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLRN1P58418 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLRN1P58418 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLRN1P58418 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLRN1P58418 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CLRN1P58418 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLRN1P58418 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLRN1P58418 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CLRN1P58418 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.47■□□□□ 0.23
CLRN1P58418 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.47■□□□□ 0.23
CLRN1P58418 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CLRN1P58418 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CLRN1P58418 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLRN1P58418 KRT8P9-201ENST00000558927 1449 ntBASIC16.47■□□□□ 0.23
CLRN1P58418 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CLRN1P58418 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLRN1P58418 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLRN1P58418 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.47■□□□□ 0.23
CLRN1P58418 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CLRN1P58418 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLRN1P58418 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLRN1P58418 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CLRN1P58418 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.47■□□□□ 0.23
CLRN1P58418 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CLRN1P58418 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLRN1P58418 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLRN1P58418 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.47■□□□□ 0.23
CLRN1P58418 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLRN1P58418 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.47■□□□□ 0.23
CLRN1P58418 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms