Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.32■□□□□ 0.36
RAB38P57729 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RAB38P57729 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB38P57729 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.32■□□□□ 0.36
RAB38P57729 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB38P57729 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB38P57729 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB38P57729 AL136038.4-201ENST00000603606 1261 ntBASIC17.32■□□□□ 0.36
RAB38P57729 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB38P57729 AC079602.3-201ENST00000623931 403 ntBASIC17.32■□□□□ 0.36
RAB38P57729 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB38P57729 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RAB38P57729 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB38P57729 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RAB38P57729 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAB38P57729 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RAB38P57729 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAB38P57729 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB38P57729 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB38P57729 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB38P57729 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB38P57729 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB38P57729 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB38P57729 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB38P57729 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAB38P57729 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RAB38P57729 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB38P57729 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RAB38P57729 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB38P57729 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB38P57729 AL391807.1-203ENST00000604392 2365 ntBASIC17.31■□□□□ 0.36
RAB38P57729 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB38P57729 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RAB38P57729 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB38P57729 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.31■□□□□ 0.36
RAB38P57729 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB38P57729 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB38P57729 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 NTF6B-201ENST00000591913 560 ntBASIC17.31■□□□□ 0.36
RAB38P57729 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB38P57729 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.31■□□□□ 0.36
RAB38P57729 AC090164.3-201ENST00000610780 2143 ntBASIC17.31■□□□□ 0.36
RAB38P57729 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB38P57729 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.31■□□□□ 0.36
RAB38P57729 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB38P57729 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RAB38P57729 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB38P57729 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB38P57729 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB38P57729 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB38P57729 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB38P57729 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.3■□□□□ 0.36
RAB38P57729 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB38P57729 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RAB38P57729 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB38P57729 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB38P57729 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 AL671277.2-201ENST00000458060 996 ntBASIC17.3■□□□□ 0.36
RAB38P57729 AC092597.1-201ENST00000487352 616 ntBASIC17.3■□□□□ 0.36
RAB38P57729 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.3■□□□□ 0.36
RAB38P57729 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.3■□□□□ 0.36
RAB38P57729 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB38P57729 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB38P57729 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms