Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH6P55285 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.2■□□□□ 0.66
CDH6P55285 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.2■□□□□ 0.66
CDH6P55285 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH6P55285 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDH6P55285 AC135776.1-201ENST00000319817 2481 ntBASIC19.19■□□□□ 0.66
CDH6P55285 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH6P55285 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CDH6P55285 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CDH6P55285 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH6P55285 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH6P55285 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH6P55285 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH6P55285 HTR7P1-202ENST00000624664 4411 ntBASIC19.19■□□□□ 0.66
CDH6P55285 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH6P55285 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH6P55285 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH6P55285 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDH6P55285 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH6P55285 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.19■□□□□ 0.66
CDH6P55285 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH6P55285 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH6P55285 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH6P55285 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.19■□□□□ 0.66
CDH6P55285 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CDH6P55285 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH6P55285 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CDH6P55285 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH6P55285 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH6P55285 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH6P55285 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH6P55285 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH6P55285 AC018470.1-201ENST00000624790 3129 ntBASIC19.18■□□□□ 0.66
CDH6P55285 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH6P55285 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH6P55285 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CDH6P55285 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.18■□□□□ 0.66
CDH6P55285 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.18■□□□□ 0.66
CDH6P55285 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH6P55285 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.18■□□□□ 0.66
CDH6P55285 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH6P55285 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CDH6P55285 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH6P55285 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.18■□□□□ 0.66
CDH6P55285 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH6P55285 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH6P55285 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH6P55285 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH6P55285 HOXB1-202ENST00000577092 1414 ntBASIC19.17■□□□□ 0.66
CDH6P55285 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDH6P55285 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.17■□□□□ 0.66
CDH6P55285 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.17■□□□□ 0.66
CDH6P55285 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDH6P55285 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
CDH6P55285 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.17■□□□□ 0.66
CDH6P55285 ESPNP-201ENST00000270691 2015 ntBASIC19.17■□□□□ 0.66
CDH6P55285 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH6P55285 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH6P55285 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH6P55285 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH6P55285 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDH6P55285 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms