Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EPHA4P54764 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.75■□□□□ 0.43
EPHA4P54764 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
EPHA4P54764 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EPHA4P54764 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.75■□□□□ 0.43
EPHA4P54764 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHA4P54764 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHA4P54764 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
EPHA4P54764 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EPHA4P54764 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.75■□□□□ 0.43
EPHA4P54764 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EPHA4P54764 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
EPHA4P54764 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.75■□□□□ 0.43
EPHA4P54764 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
EPHA4P54764 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.74■□□□□ 0.43
EPHA4P54764 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.74■□□□□ 0.43
EPHA4P54764 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.74■□□□□ 0.43
EPHA4P54764 TPSP2-201ENST00000561760 610 ntBASIC17.74■□□□□ 0.43
EPHA4P54764 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.74■□□□□ 0.43
EPHA4P54764 PRELID1P1-202ENST00000567272 903 ntBASIC17.74■□□□□ 0.43
EPHA4P54764 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 AL691432.3-201ENST00000621860 400 ntBASIC17.74■□□□□ 0.43
EPHA4P54764 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
EPHA4P54764 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EPHA4P54764 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EPHA4P54764 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EPHA4P54764 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.73■□□□□ 0.43
EPHA4P54764 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EPHA4P54764 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHA4P54764 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.73■□□□□ 0.43
EPHA4P54764 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHA4P54764 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHA4P54764 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.73■□□□□ 0.43
EPHA4P54764 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EPHA4P54764 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.73■□□□□ 0.43
EPHA4P54764 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.73■□□□□ 0.43
EPHA4P54764 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.73■□□□□ 0.43
EPHA4P54764 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHA4P54764 AC009102.3-201ENST00000623118 1491 ntBASIC17.73■□□□□ 0.43
EPHA4P54764 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHA4P54764 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHA4P54764 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHA4P54764 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHA4P54764 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHA4P54764 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EPHA4P54764 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.72■□□□□ 0.43
EPHA4P54764 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.72■□□□□ 0.43
EPHA4P54764 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 AC116562.4-201ENST00000641316 2276 ntBASIC17.72■□□□□ 0.43
EPHA4P54764 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.72■□□□□ 0.43
EPHA4P54764 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
EPHA4P54764 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.72■□□□□ 0.43
EPHA4P54764 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.72■□□□□ 0.43
EPHA4P54764 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
EPHA4P54764 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.72■□□□□ 0.43
EPHA4P54764 NUS1P1-201ENST00000446295 882 ntBASIC17.72■□□□□ 0.43
EPHA4P54764 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.72■□□□□ 0.43
EPHA4P54764 GUSBP12-201ENST00000513727 720 ntBASIC17.72■□□□□ 0.43
EPHA4P54764 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.72■□□□□ 0.43
EPHA4P54764 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.72■□□□□ 0.43
EPHA4P54764 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.72■□□□□ 0.43
EPHA4P54764 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHA4P54764 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.71■□□□□ 0.43
EPHA4P54764 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
EPHA4P54764 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHA4P54764 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms