Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.7■□□□□ 0.9
EPHB4P54760 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
EPHB4P54760 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
EPHB4P54760 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EPHB4P54760 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.7■□□□□ 0.9
EPHB4P54760 MIR662-201ENST00000384847 95 ntBASIC20.7■□□□□ 0.9
EPHB4P54760 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.7■□□□□ 0.9
EPHB4P54760 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.7■□□□□ 0.9
EPHB4P54760 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.7■□□□□ 0.9
EPHB4P54760 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.7■□□□□ 0.9
EPHB4P54760 AC012615.1-201ENST00000565797 1299 ntBASIC20.7■□□□□ 0.9
EPHB4P54760 LINC01711-201ENST00000598340 967 ntBASIC20.7■□□□□ 0.9
EPHB4P54760 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.7■□□□□ 0.9
EPHB4P54760 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.7■□□□□ 0.9
EPHB4P54760 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EPHB4P54760 AL157888.1-201ENST00000631930 593 ntBASIC20.7■□□□□ 0.9
EPHB4P54760 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EPHB4P54760 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EPHB4P54760 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EPHB4P54760 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
EPHB4P54760 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.7■□□□□ 0.9
EPHB4P54760 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EPHB4P54760 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EPHB4P54760 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EPHB4P54760 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
EPHB4P54760 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
EPHB4P54760 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
EPHB4P54760 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
EPHB4P54760 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.69■□□□□ 0.9
EPHB4P54760 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
EPHB4P54760 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
EPHB4P54760 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.69■□□□□ 0.9
EPHB4P54760 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 AL590627.1-203ENST00000421194 1026 ntBASIC20.69■□□□□ 0.9
EPHB4P54760 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
EPHB4P54760 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
EPHB4P54760 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.69■□□□□ 0.9
EPHB4P54760 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.69■□□□□ 0.9
EPHB4P54760 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.69■□□□□ 0.9
EPHB4P54760 AF228730.7-201ENST00000641842 219 ntBASIC20.69■□□□□ 0.9
EPHB4P54760 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
EPHB4P54760 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.69■□□□□ 0.9
EPHB4P54760 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.69■□□□□ 0.9
EPHB4P54760 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
EPHB4P54760 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
EPHB4P54760 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EPHB4P54760 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.68■□□□□ 0.9
EPHB4P54760 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB4P54760 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB4P54760 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB4P54760 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
EPHB4P54760 AC036111.1-201ENST00000533973 1582 ntBASIC20.68■□□□□ 0.9
EPHB4P54760 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.68■□□□□ 0.9
EPHB4P54760 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB4P54760 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
EPHB4P54760 AL032819.2-201ENST00000624543 2162 ntBASIC20.68■□□□□ 0.9
EPHB4P54760 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.68■□□□□ 0.9
EPHB4P54760 SEC1P-202ENST00000473944 940 ntBASIC20.68■□□□□ 0.9
EPHB4P54760 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
EPHB4P54760 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB4P54760 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB4P54760 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EPHB4P54760 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.68■□□□□ 0.9
EPHB4P54760 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.68■□□□□ 0.9
EPHB4P54760 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
EPHB4P54760 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.68■□□□□ 0.9
EPHB4P54760 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB4P54760 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.67■□□□□ 0.9
EPHB4P54760 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB4P54760 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB4P54760 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB4P54760 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB4P54760 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB4P54760 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
EPHB4P54760 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.67■□□□□ 0.9
EPHB4P54760 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.67■□□□□ 0.9
EPHB4P54760 MIR574-201ENST00000385209 96 ntBASIC20.67■□□□□ 0.9
EPHB4P54760 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.67■□□□□ 0.9
EPHB4P54760 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB4P54760 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.67■□□□□ 0.9
EPHB4P54760 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.67■□□□□ 0.9
EPHB4P54760 AC138894.3-201ENST00000603787 634 ntBASIC20.67■□□□□ 0.9
EPHB4P54760 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB4P54760 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
EPHB4P54760 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
EPHB4P54760 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms