Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP1B3P54709 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP1B3P54709 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1B3P54709 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP1B3P54709 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1B3P54709 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1B3P54709 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
ATP1B3P54709 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP1B3P54709 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP1B3P54709 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1B3P54709 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP1B3P54709 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.03■□□□□ 0.16
ATP1B3P54709 MIR6786-201ENST00000616843 113 ntBASIC16.03■□□□□ 0.16
ATP1B3P54709 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.03■□□□□ 0.16
ATP1B3P54709 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1B3P54709 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1B3P54709 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1B3P54709 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
ATP1B3P54709 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1B3P54709 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1B3P54709 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP1B3P54709 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATP1B3P54709 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.03■□□□□ 0.16
ATP1B3P54709 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATP1B3P54709 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP1B3P54709 AL135905.2-201ENST00000584934 1404 ntBASIC16.02■□□□□ 0.16
ATP1B3P54709 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP1B3P54709 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP1B3P54709 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP1B3P54709 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP1B3P54709 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP1B3P54709 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP1B3P54709 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
ATP1B3P54709 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP1B3P54709 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP1B3P54709 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP1B3P54709 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATP1B3P54709 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.02■□□□□ 0.16
ATP1B3P54709 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ATP1B3P54709 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.02■□□□□ 0.16
ATP1B3P54709 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.02■□□□□ 0.16
ATP1B3P54709 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATP1B3P54709 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP1B3P54709 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP1B3P54709 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.02■□□□□ 0.16
ATP1B3P54709 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.02■□□□□ 0.16
ATP1B3P54709 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.02■□□□□ 0.16
ATP1B3P54709 AL359736.2-201ENST00000621992 437 ntBASIC16.02■□□□□ 0.16
ATP1B3P54709 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATP1B3P54709 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATP1B3P54709 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
ATP1B3P54709 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.02■□□□□ 0.15
ATP1B3P54709 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP1B3P54709 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATP1B3P54709 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
ATP1B3P54709 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP1B3P54709 FSCN1P1-201ENST00000568912 1481 ntBASIC16.02■□□□□ 0.15
ATP1B3P54709 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
ATP1B3P54709 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATP1B3P54709 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.02■□□□□ 0.15
ATP1B3P54709 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.02■□□□□ 0.15
ATP1B3P54709 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
ATP1B3P54709 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP1B3P54709 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP1B3P54709 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP1B3P54709 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ATP1B3P54709 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.01■□□□□ 0.15
ATP1B3P54709 KRT18P29-201ENST00000397031 1267 ntBASIC16.01■□□□□ 0.15
ATP1B3P54709 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.01■□□□□ 0.15
ATP1B3P54709 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP1B3P54709 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.01■□□□□ 0.15
ATP1B3P54709 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP1B3P54709 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP1B3P54709 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP1B3P54709 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ATP1B3P54709 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ATP1B3P54709 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP1B3P54709 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
ATP1B3P54709 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.01■□□□□ 0.15
ATP1B3P54709 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ATP1B3P54709 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.01■□□□□ 0.15
ATP1B3P54709 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATP1B3P54709 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms