Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.82■□□□□ 0.92
USP11P51784 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
USP11P51784 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.81■□□□□ 0.92
USP11P51784 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
USP11P51784 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP11P51784 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.81■□□□□ 0.92
USP11P51784 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.81■□□□□ 0.92
USP11P51784 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP11P51784 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP11P51784 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
USP11P51784 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.81■□□□□ 0.92
USP11P51784 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP11P51784 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP11P51784 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP11P51784 VENTXP5-201ENST00000523979 775 ntBASIC20.81■□□□□ 0.92
USP11P51784 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.81■□□□□ 0.92
USP11P51784 AC024563.2-201ENST00000603282 481 ntBASIC20.81■□□□□ 0.92
USP11P51784 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.81■□□□□ 0.92
USP11P51784 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
USP11P51784 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP11P51784 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP11P51784 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP11P51784 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP11P51784 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP11P51784 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP11P51784 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP11P51784 AL024508.2-201ENST00000607749 1894 ntBASIC20.81■□□□□ 0.92
USP11P51784 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.81■□□□□ 0.92
USP11P51784 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP11P51784 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.81■□□□□ 0.92
USP11P51784 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
USP11P51784 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP11P51784 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP11P51784 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP11P51784 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.8■□□□□ 0.92
USP11P51784 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP11P51784 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.8■□□□□ 0.92
USP11P51784 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP11P51784 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP11P51784 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP11P51784 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP11P51784 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.8■□□□□ 0.92
USP11P51784 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP11P51784 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.8■□□□□ 0.92
USP11P51784 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.8■□□□□ 0.92
USP11P51784 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.8■□□□□ 0.92
USP11P51784 AC008687.5-201ENST00000593746 558 ntBASIC20.8■□□□□ 0.92
USP11P51784 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.8■□□□□ 0.92
USP11P51784 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
USP11P51784 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.8■□□□□ 0.92
USP11P51784 AC099343.3-201ENST00000605834 2503 ntBASIC20.8■□□□□ 0.92
USP11P51784 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP11P51784 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP11P51784 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.8■□□□□ 0.92
USP11P51784 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
USP11P51784 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
USP11P51784 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
USP11P51784 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP11P51784 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.8■□□□□ 0.92
USP11P51784 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.8■□□□□ 0.92
USP11P51784 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.8■□□□□ 0.92
USP11P51784 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.79■□□□□ 0.92
USP11P51784 AC005332.1-201ENST00000577698 1310 ntBASIC20.79■□□□□ 0.92
USP11P51784 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP11P51784 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP11P51784 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
USP11P51784 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.79■□□□□ 0.92
USP11P51784 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP11P51784 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.79■□□□□ 0.92
USP11P51784 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP11P51784 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.79■□□□□ 0.92
USP11P51784 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.79■□□□□ 0.92
USP11P51784 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.79■□□□□ 0.92
USP11P51784 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.79■□□□□ 0.92
USP11P51784 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.79■□□□□ 0.92
USP11P51784 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP11P51784 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP11P51784 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP11P51784 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
USP11P51784 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
USP11P51784 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP11P51784 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
USP11P51784 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP11P51784 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP11P51784 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.78■□□□□ 0.92
USP11P51784 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.78■□□□□ 0.92
USP11P51784 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP11P51784 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP11P51784 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
USP11P51784 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP11P51784 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.78■□□□□ 0.92
USP11P51784 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
USP11P51784 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP11P51784 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.78■□□□□ 0.92
USP11P51784 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.78■□□□□ 0.92
USP11P51784 GMCL1P1-201ENST00000463439 1581 ntBASIC20.78■□□□□ 0.92
USP11P51784 AL162741.1-201ENST00000565563 1558 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms