Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC34P49427 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC34P49427 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC34P49427 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CDC34P49427 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC34P49427 AC011767.1-201ENST00000617410 1153 ntBASIC14.59□□□□□ -0.07
CDC34P49427 AC006557.6-201ENST00000623071 864 ntBASIC14.59□□□□□ -0.07
CDC34P49427 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC34P49427 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC34P49427 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.59□□□□□ -0.07
CDC34P49427 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDC34P49427 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.59□□□□□ -0.07
CDC34P49427 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
CDC34P49427 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CDC34P49427 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDC34P49427 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
CDC34P49427 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDC34P49427 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDC34P49427 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CDC34P49427 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC34P49427 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC34P49427 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC34P49427 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC34P49427 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC34P49427 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.58□□□□□ -0.08
CDC34P49427 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC34P49427 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDC34P49427 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.58□□□□□ -0.08
CDC34P49427 AC068587.9-201ENST00000641814 219 ntBASIC14.58□□□□□ -0.08
CDC34P49427 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC34P49427 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC34P49427 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.58□□□□□ -0.08
CDC34P49427 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC34P49427 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC34P49427 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDC34P49427 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDC34P49427 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC34P49427 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.58□□□□□ -0.08
CDC34P49427 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDC34P49427 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.57□□□□□ -0.08
CDC34P49427 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.57□□□□□ -0.08
CDC34P49427 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
CDC34P49427 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.57□□□□□ -0.08
CDC34P49427 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.57□□□□□ -0.08
CDC34P49427 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CDC34P49427 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDC34P49427 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.57□□□□□ -0.08
CDC34P49427 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 AC124067.4-201ENST00000519691 2379 ntBASIC14.57□□□□□ -0.08
CDC34P49427 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
CDC34P49427 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.57□□□□□ -0.08
CDC34P49427 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CDC34P49427 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.57□□□□□ -0.08
CDC34P49427 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.57□□□□□ -0.08
CDC34P49427 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.57□□□□□ -0.08
CDC34P49427 KRT8P45-201ENST00000414328 1447 ntBASIC14.57□□□□□ -0.08
CDC34P49427 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.57□□□□□ -0.08
CDC34P49427 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDC34P49427 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.56□□□□□ -0.08
CDC34P49427 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.56□□□□□ -0.08
CDC34P49427 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CDC34P49427 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDC34P49427 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 AC084018.2-201ENST00000613093 2607 ntBASIC14.56□□□□□ -0.08
CDC34P49427 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC34P49427 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CDC34P49427 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms