Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.68■□□□□ 0.9
HTTP42858 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HTTP42858 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.68■□□□□ 0.9
HTTP42858 AC002310.6-201ENST00000624451 1377 ntBASIC20.68■□□□□ 0.9
HTTP42858 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.67■□□□□ 0.9
HTTP42858 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.67■□□□□ 0.9
HTTP42858 AC125437.2-201ENST00000625180 2167 ntBASIC20.67■□□□□ 0.9
HTTP42858 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HTTP42858 MIR770-201ENST00000390219 98 ntBASIC20.67■□□□□ 0.9
HTTP42858 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.67■□□□□ 0.9
HTTP42858 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.67■□□□□ 0.9
HTTP42858 AC093028.1-201ENST00000622998 982 ntBASIC20.67■□□□□ 0.9
HTTP42858 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.67■□□□□ 0.9
HTTP42858 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HTTP42858 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.67■□□□□ 0.9
HTTP42858 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HTTP42858 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.67■□□□□ 0.9
HTTP42858 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HTTP42858 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HTTP42858 AC125634.1-201ENST00000438758 1403 ntBASIC20.67■□□□□ 0.9
HTTP42858 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.67■□□□□ 0.9
HTTP42858 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.67■□□□□ 0.9
HTTP42858 AL139288.1-201ENST00000623748 933 ntBASIC20.67■□□□□ 0.9
HTTP42858 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HTTP42858 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HTTP42858 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HTTP42858 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.67■□□□□ 0.9
HTTP42858 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HTTP42858 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HTTP42858 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
HTTP42858 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.67■□□□□ 0.9
HTTP42858 AP002472.1-201ENST00000577490 586 ntBASIC20.67■□□□□ 0.9
HTTP42858 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTTP42858 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.66■□□□□ 0.9
HTTP42858 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTTP42858 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.66■□□□□ 0.9
HTTP42858 KRT8P32-201ENST00000512863 1461 ntBASIC20.66■□□□□ 0.9
HTTP42858 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTTP42858 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.66■□□□□ 0.9
HTTP42858 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTTP42858 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.66■□□□□ 0.9
HTTP42858 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
HTTP42858 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.66■□□□□ 0.9
HTTP42858 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HTTP42858 AC011467.2-201ENST00000598425 242 ntBASIC20.66■□□□□ 0.9
HTTP42858 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.66■□□□□ 0.9
HTTP42858 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
HTTP42858 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.66■□□□□ 0.9
HTTP42858 KRT8P50-201ENST00000562022 1438 ntBASIC20.66■□□□□ 0.9
HTTP42858 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTTP42858 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTTP42858 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.66■□□□□ 0.9
HTTP42858 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTTP42858 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HTTP42858 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
HTTP42858 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HTTP42858 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTTP42858 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HTTP42858 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HTTP42858 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.65■□□□□ 0.9
HTTP42858 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.65■□□□□ 0.9
HTTP42858 TCF3P1-201ENST00000423021 1937 ntBASIC20.65■□□□□ 0.9
HTTP42858 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTTP42858 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.65■□□□□ 0.9
HTTP42858 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.65■□□□□ 0.9
HTTP42858 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HTTP42858 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTTP42858 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.65■□□□□ 0.9
HTTP42858 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.65■□□□□ 0.9
HTTP42858 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.65■□□□□ 0.9
HTTP42858 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTTP42858 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.65■□□□□ 0.9
HTTP42858 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HTTP42858 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HTTP42858 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HTTP42858 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.64■□□□□ 0.9
HTTP42858 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.64■□□□□ 0.9
HTTP42858 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.64■□□□□ 0.9
HTTP42858 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
HTTP42858 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.64■□□□□ 0.9
HTTP42858 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HTTP42858 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTTP42858 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.64■□□□□ 0.89
HTTP42858 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HTTP42858 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
HTTP42858 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HTTP42858 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTTP42858 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HTTP42858 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HTTP42858 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HTTP42858 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.64■□□□□ 0.89
HTTP42858 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
HTTP42858 AC254562.1-201ENST00000417586 456 ntBASIC20.64■□□□□ 0.89
HTTP42858 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.64■□□□□ 0.89
HTTP42858 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HTTP42858 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.64■□□□□ 0.89
HTTP42858 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.63■□□□□ 0.89
HTTP42858 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HTTP42858 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.63■□□□□ 0.89
HTTP42858 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms