Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 KRT18P68-201ENST00000392293 1000 ntBASIC16.56■□□□□ 0.24
SOX6P35712 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.56■□□□□ 0.24
SOX6P35712 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
SOX6P35712 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.56■□□□□ 0.24
SOX6P35712 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
SOX6P35712 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SOX6P35712 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SOX6P35712 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.56■□□□□ 0.24
SOX6P35712 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.55■□□□□ 0.24
SOX6P35712 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.55■□□□□ 0.24
SOX6P35712 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.55■□□□□ 0.24
SOX6P35712 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SOX6P35712 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.55■□□□□ 0.24
SOX6P35712 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.55■□□□□ 0.24
SOX6P35712 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SOX6P35712 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SOX6P35712 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.55■□□□□ 0.24
SOX6P35712 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.55■□□□□ 0.24
SOX6P35712 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SOX6P35712 IKBKGP1-201ENST00000612193 1073 ntBASIC16.55■□□□□ 0.24
SOX6P35712 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SOX6P35712 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SOX6P35712 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.55■□□□□ 0.24
SOX6P35712 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SOX6P35712 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 AL139384.1-201ENST00000612143 3047 ntBASIC16.54■□□□□ 0.24
SOX6P35712 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.54■□□□□ 0.24
SOX6P35712 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SOX6P35712 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SOX6P35712 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.54■□□□□ 0.24
SOX6P35712 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.54■□□□□ 0.24
SOX6P35712 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.54■□□□□ 0.24
SOX6P35712 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.54■□□□□ 0.24
SOX6P35712 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SOX6P35712 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.54■□□□□ 0.24
SOX6P35712 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.54■□□□□ 0.24
SOX6P35712 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SOX6P35712 NKILA-202ENST00000614771 2598 ntBASIC16.54■□□□□ 0.24
SOX6P35712 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.54■□□□□ 0.24
SOX6P35712 FLJ13224-201ENST00000313737 1514 ntBASIC16.54■□□□□ 0.24
SOX6P35712 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 REXO1L9P-201ENST00000604264 2108 ntBASIC16.54■□□□□ 0.24
SOX6P35712 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SOX6P35712 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.53■□□□□ 0.24
SOX6P35712 KRT8P8-201ENST00000434750 1448 ntBASIC16.53■□□□□ 0.24
SOX6P35712 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SOX6P35712 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms