Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 LINC01568-207ENST00000641790 1380 ntBASIC19.44■□□□□ 0.7
RFC1P35251 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.44■□□□□ 0.7
RFC1P35251 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RFC1P35251 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.44■□□□□ 0.7
RFC1P35251 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC1P35251 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC1P35251 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
RFC1P35251 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC1P35251 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC1P35251 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.44■□□□□ 0.7
RFC1P35251 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC1P35251 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFC1P35251 AP000593.1-201ENST00000393668 712 ntBASIC19.44■□□□□ 0.7
RFC1P35251 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
RFC1P35251 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFC1P35251 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.44■□□□□ 0.7
RFC1P35251 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFC1P35251 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.44■□□□□ 0.7
RFC1P35251 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.44■□□□□ 0.7
RFC1P35251 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.44■□□□□ 0.7
RFC1P35251 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC1P35251 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC1P35251 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC1P35251 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.44■□□□□ 0.7
RFC1P35251 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.44■□□□□ 0.7
RFC1P35251 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC1P35251 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC1P35251 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RFC1P35251 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC1P35251 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFC1P35251 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC1P35251 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC1P35251 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RFC1P35251 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFC1P35251 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
RFC1P35251 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFC1P35251 HOXB1-202ENST00000577092 1414 ntBASIC19.43■□□□□ 0.7
RFC1P35251 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFC1P35251 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC1P35251 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.43■□□□□ 0.7
RFC1P35251 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC1P35251 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC1P35251 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.43■□□□□ 0.7
RFC1P35251 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC1P35251 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.43■□□□□ 0.7
RFC1P35251 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.43■□□□□ 0.7
RFC1P35251 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.43■□□□□ 0.7
RFC1P35251 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.43■□□□□ 0.7
RFC1P35251 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.43■□□□□ 0.7
RFC1P35251 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.43■□□□□ 0.7
RFC1P35251 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.43■□□□□ 0.7
RFC1P35251 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC1P35251 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFC1P35251 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC1P35251 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.43■□□□□ 0.7
RFC1P35251 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.43■□□□□ 0.7
RFC1P35251 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.42■□□□□ 0.7
RFC1P35251 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.42■□□□□ 0.7
RFC1P35251 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
RFC1P35251 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.42■□□□□ 0.7
RFC1P35251 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 KRT18P23-201ENST00000435622 1283 ntBASIC19.42■□□□□ 0.7
RFC1P35251 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.42■□□□□ 0.7
RFC1P35251 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
RFC1P35251 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.42■□□□□ 0.7
RFC1P35251 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.42■□□□□ 0.7
RFC1P35251 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RFC1P35251 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.42■□□□□ 0.7
RFC1P35251 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RFC1P35251 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFC1P35251 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC1P35251 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFC1P35251 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFC1P35251 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFC1P35251 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RFC1P35251 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFC1P35251 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFC1P35251 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RFC1P35251 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms