Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.09■□□□□ 0.81
RFX1P22670 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX1P22670 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.09■□□□□ 0.81
RFX1P22670 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX1P22670 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RFX1P22670 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RFX1P22670 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFX1P22670 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.08■□□□□ 0.81
RFX1P22670 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
RFX1P22670 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RFX1P22670 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFX1P22670 AL354751.1-201ENST00000412768 1863 ntBASIC20.08■□□□□ 0.81
RFX1P22670 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFX1P22670 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.08■□□□□ 0.81
RFX1P22670 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.08■□□□□ 0.81
RFX1P22670 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.08■□□□□ 0.81
RFX1P22670 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.08■□□□□ 0.81
RFX1P22670 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.08■□□□□ 0.81
RFX1P22670 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.08■□□□□ 0.81
RFX1P22670 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
RFX1P22670 AC140113.3-201ENST00000605663 199 ntBASIC20.08■□□□□ 0.81
RFX1P22670 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RFX1P22670 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX1P22670 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.08■□□□□ 0.8
RFX1P22670 AC008556.1-201ENST00000610908 2040 ntBASIC20.08■□□□□ 0.8
RFX1P22670 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.08■□□□□ 0.8
RFX1P22670 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RFX1P22670 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX1P22670 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX1P22670 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX1P22670 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RFX1P22670 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.07■□□□□ 0.8
RFX1P22670 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX1P22670 AL023284.2-201ENST00000405850 579 ntBASIC20.07■□□□□ 0.8
RFX1P22670 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.07■□□□□ 0.8
RFX1P22670 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX1P22670 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RFX1P22670 AL512604.3-201ENST00000569583 964 ntBASIC20.07■□□□□ 0.8
RFX1P22670 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.07■□□□□ 0.8
RFX1P22670 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.07■□□□□ 0.8
RFX1P22670 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
RFX1P22670 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RFX1P22670 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX1P22670 AL390961.4-201ENST00000623958 2535 ntBASIC20.07■□□□□ 0.8
RFX1P22670 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX1P22670 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RFX1P22670 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.07■□□□□ 0.8
RFX1P22670 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX1P22670 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX1P22670 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFX1P22670 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.06■□□□□ 0.8
RFX1P22670 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX1P22670 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX1P22670 MIR564-202ENST00000385049 94 ntBASIC20.06■□□□□ 0.8
RFX1P22670 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RFX1P22670 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFX1P22670 SLC25A1P2-201ENST00000430693 912 ntBASIC20.06■□□□□ 0.8
RFX1P22670 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
RFX1P22670 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
RFX1P22670 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
RFX1P22670 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.06■□□□□ 0.8
RFX1P22670 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.06■□□□□ 0.8
RFX1P22670 AL031432.5-201ENST00000641059 760 ntBASIC20.06■□□□□ 0.8
RFX1P22670 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX1P22670 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RFX1P22670 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX1P22670 GPAT2P1-201ENST00000444924 1672 ntBASIC20.06■□□□□ 0.8
RFX1P22670 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RFX1P22670 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RFX1P22670 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFX1P22670 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX1P22670 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX1P22670 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.05■□□□□ 0.8
RFX1P22670 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX1P22670 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.05■□□□□ 0.8
RFX1P22670 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX1P22670 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RFX1P22670 MYLKP1-201ENST00000509077 1580 ntBASIC20.05■□□□□ 0.8
RFX1P22670 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX1P22670 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX1P22670 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.05■□□□□ 0.8
RFX1P22670 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX1P22670 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.05■□□□□ 0.8
RFX1P22670 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX1P22670 HOMER2P1-201ENST00000455653 964 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms