Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCLP19338 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
NCLP19338 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
NCLP19338 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCLP19338 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NCLP19338 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NCLP19338 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.94■■□□□ 1.1
NCLP19338 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCLP19338 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NCLP19338 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCLP19338 OR6D1P-203ENST00000641209 4860 ntBASIC21.94■■□□□ 1.1
NCLP19338 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
NCLP19338 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
NCLP19338 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.93■■□□□ 1.1
NCLP19338 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
NCLP19338 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCLP19338 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.93■■□□□ 1.1
NCLP19338 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
NCLP19338 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCLP19338 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCLP19338 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
NCLP19338 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.93■■□□□ 1.1
NCLP19338 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
NCLP19338 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
NCLP19338 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCLP19338 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
NCLP19338 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
NCLP19338 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.93■■□□□ 1.1
NCLP19338 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCLP19338 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
NCLP19338 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.93■■□□□ 1.1
NCLP19338 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
NCLP19338 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCLP19338 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.93■■□□□ 1.1
NCLP19338 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.93■■□□□ 1.1
NCLP19338 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NCLP19338 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
NCLP19338 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
NCLP19338 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NCLP19338 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NCLP19338 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.93■■□□□ 1.1
NCLP19338 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
NCLP19338 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.93■■□□□ 1.1
NCLP19338 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NCLP19338 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCLP19338 FER1L4-210ENST00000615531 5998 ntBASIC21.93■■□□□ 1.1
NCLP19338 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCLP19338 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCLP19338 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCLP19338 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCLP19338 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
NCLP19338 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.92■■□□□ 1.1
NCLP19338 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.92■■□□□ 1.1
NCLP19338 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.92■■□□□ 1.1
NCLP19338 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.92■■□□□ 1.1
NCLP19338 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.92■■□□□ 1.1
NCLP19338 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NCLP19338 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.92■■□□□ 1.1
NCLP19338 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
NCLP19338 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 AL596275.1-201ENST00000423464 877 ntBASIC21.92■■□□□ 1.1
NCLP19338 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.92■■□□□ 1.1
NCLP19338 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.92■■□□□ 1.1
NCLP19338 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.92■■□□□ 1.1
NCLP19338 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.92■■□□□ 1.1
NCLP19338 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.92■■□□□ 1.1
NCLP19338 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NCLP19338 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.92■■□□□ 1.1
NCLP19338 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.92■■□□□ 1.1
NCLP19338 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCLP19338 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.92■■□□□ 1.1
NCLP19338 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
NCLP19338 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
NCLP19338 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.92■■□□□ 1.1
NCLP19338 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NCLP19338 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.91■■□□□ 1.1
NCLP19338 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NCLP19338 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.91■■□□□ 1.1
NCLP19338 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.91■■□□□ 1.1
NCLP19338 AC139713.2-201ENST00000641328 2723 ntBASIC21.91■■□□□ 1.1
NCLP19338 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
NCLP19338 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NCLP19338 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NCLP19338 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
NCLP19338 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NCLP19338 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms