Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC1P18887 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
XRCC1P18887 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC1P18887 AC139887.4-201ENST00000607877 719 ntBASIC18.41■□□□□ 0.54
XRCC1P18887 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
XRCC1P18887 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC1P18887 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.41■□□□□ 0.54
XRCC1P18887 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC1P18887 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
XRCC1P18887 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC1P18887 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.41■□□□□ 0.54
XRCC1P18887 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
XRCC1P18887 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.41■□□□□ 0.54
XRCC1P18887 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.4■□□□□ 0.54
XRCC1P18887 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.4■□□□□ 0.54
XRCC1P18887 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.4■□□□□ 0.54
XRCC1P18887 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
XRCC1P18887 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
XRCC1P18887 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 RNF152P1-201ENST00000397754 604 ntBASIC18.4■□□□□ 0.54
XRCC1P18887 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.4■□□□□ 0.54
XRCC1P18887 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
XRCC1P18887 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
XRCC1P18887 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.4■□□□□ 0.54
XRCC1P18887 YBX1P2-201ENST00000489612 999 ntBASIC18.4■□□□□ 0.54
XRCC1P18887 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.4■□□□□ 0.54
XRCC1P18887 KRT18P35-201ENST00000510488 1269 ntBASIC18.4■□□□□ 0.54
XRCC1P18887 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.4■□□□□ 0.54
XRCC1P18887 MIR4674-201ENST00000582457 87 ntBASIC18.4■□□□□ 0.54
XRCC1P18887 AL445228.2-201ENST00000605589 952 ntBASIC18.4■□□□□ 0.54
XRCC1P18887 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.4■□□□□ 0.54
XRCC1P18887 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
XRCC1P18887 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
XRCC1P18887 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
XRCC1P18887 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XRCC1P18887 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
XRCC1P18887 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.39■□□□□ 0.54
XRCC1P18887 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
XRCC1P18887 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.39■□□□□ 0.54
XRCC1P18887 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
XRCC1P18887 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
XRCC1P18887 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC1P18887 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC1P18887 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC1P18887 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.39■□□□□ 0.53
XRCC1P18887 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC1P18887 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC1P18887 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.39■□□□□ 0.53
XRCC1P18887 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.39■□□□□ 0.53
XRCC1P18887 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
XRCC1P18887 FEM1AP3-201ENST00000403722 1741 ntBASIC18.39■□□□□ 0.53
XRCC1P18887 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC1P18887 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.39■□□□□ 0.53
XRCC1P18887 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
XRCC1P18887 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC1P18887 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC1P18887 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC1P18887 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC1P18887 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
XRCC1P18887 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
XRCC1P18887 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC1P18887 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC1P18887 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC1P18887 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC1P18887 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.38■□□□□ 0.53
XRCC1P18887 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC1P18887 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC1P18887 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.38■□□□□ 0.53
XRCC1P18887 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
XRCC1P18887 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.38■□□□□ 0.53
XRCC1P18887 AC067852.2-201ENST00000590513 2313 ntBASIC18.38■□□□□ 0.53
XRCC1P18887 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
XRCC1P18887 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC1P18887 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
XRCC1P18887 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC1P18887 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.38■□□□□ 0.53
XRCC1P18887 TSPY5P-201ENST00000426936 936 ntBASIC18.38■□□□□ 0.53
XRCC1P18887 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
XRCC1P18887 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.38■□□□□ 0.53
XRCC1P18887 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.38■□□□□ 0.53
XRCC1P18887 AC063952.2-201ENST00000498792 1227 ntBASIC18.38■□□□□ 0.53
XRCC1P18887 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms