Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CFTRP13569 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC31.5■■■□□ 2.63
CFTRP13569 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC31.5■■■□□ 2.63
CFTRP13569 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CFTRP13569 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC31.5■■■□□ 2.63
CFTRP13569 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC31.5■■■□□ 2.63
CFTRP13569 CYMP-203ENST00000474680 1263 ntBASIC31.5■■■□□ 2.63
CFTRP13569 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC31.5■■■□□ 2.63
CFTRP13569 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC31.5■■■□□ 2.63
CFTRP13569 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC31.5■■■□□ 2.63
CFTRP13569 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC31.5■■■□□ 2.63
CFTRP13569 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC31.5■■■□□ 2.63
CFTRP13569 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC31.5■■■□□ 2.63
CFTRP13569 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC31.49■■■□□ 2.63
CFTRP13569 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
CFTRP13569 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC31.49■■■□□ 2.63
CFTRP13569 ETFA-208ENST00000559602 792 ntTSL 3 BASIC31.49■■■□□ 2.63
CFTRP13569 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC31.49■■■□□ 2.63
CFTRP13569 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC31.49■■■□□ 2.63
CFTRP13569 AP000867.4-201ENST00000641616 219 ntBASIC31.49■■■□□ 2.63
CFTRP13569 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CFTRP13569 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CFTRP13569 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC31.49■■■□□ 2.63
CFTRP13569 SOD2-201ENST00000337404 991 ntTSL 2 BASIC31.48■■■□□ 2.63
CFTRP13569 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CFTRP13569 MIR3197-201ENST00000582241 73 ntBASIC31.48■■■□□ 2.63
CFTRP13569 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC31.48■■■□□ 2.63
CFTRP13569 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC31.48■■■□□ 2.63
CFTRP13569 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CFTRP13569 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CFTRP13569 AC112907.3-201ENST00000577781 2400 ntBASIC31.48■■■□□ 2.63
CFTRP13569 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
CFTRP13569 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CFTRP13569 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
CFTRP13569 INIP-202ENST00000374236 874 ntTSL 2 BASIC31.47■■■□□ 2.63
CFTRP13569 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CFTRP13569 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC31.47■■■□□ 2.63
CFTRP13569 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CFTRP13569 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CFTRP13569 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CFTRP13569 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC31.47■■■□□ 2.63
CFTRP13569 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC31.47■■■□□ 2.63
CFTRP13569 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CFTRP13569 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CFTRP13569 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
CFTRP13569 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
CFTRP13569 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
CFTRP13569 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CFTRP13569 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CFTRP13569 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
CFTRP13569 METTL21AP1-201ENST00000438852 635 ntBASIC31.46■■■□□ 2.63
CFTRP13569 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CFTRP13569 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC31.46■■■□□ 2.63
CFTRP13569 SDHAP2-201ENST00000455183 2001 ntBASIC31.46■■■□□ 2.63
CFTRP13569 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
CFTRP13569 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CFTRP13569 AC073621.1-201ENST00000392730 636 ntBASIC31.46■■■□□ 2.63
CFTRP13569 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
CFTRP13569 MCCD1P2-201ENST00000423228 335 ntBASIC31.46■■■□□ 2.63
CFTRP13569 ALG1L5P-201ENST00000482043 771 ntBASIC31.46■■■□□ 2.63
CFTRP13569 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC31.46■■■□□ 2.63
CFTRP13569 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
CFTRP13569 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC31.46■■■□□ 2.63
CFTRP13569 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC31.46■■■□□ 2.63
CFTRP13569 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC31.46■■■□□ 2.63
CFTRP13569 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC31.46■■■□□ 2.63
CFTRP13569 AC073592.4-201ENST00000623827 446 ntBASIC31.46■■■□□ 2.63
CFTRP13569 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CFTRP13569 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC31.45■■■□□ 2.63
CFTRP13569 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC31.45■■■□□ 2.63
CFTRP13569 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
CFTRP13569 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CFTRP13569 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CFTRP13569 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CFTRP13569 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
CFTRP13569 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
CFTRP13569 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC31.45■■■□□ 2.63
CFTRP13569 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC31.45■■■□□ 2.63
CFTRP13569 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
CFTRP13569 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC31.45■■■□□ 2.62
CFTRP13569 BEX3-201ENST00000361298 921 ntTSL 2 BASIC31.45■■■□□ 2.62
CFTRP13569 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CFTRP13569 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC31.45■■■□□ 2.62
CFTRP13569 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC31.45■■■□□ 2.62
CFTRP13569 MTDHP5-201ENST00000598980 586 ntBASIC31.45■■■□□ 2.62
CFTRP13569 AC064836.3-201ENST00000607928 673 ntBASIC31.45■■■□□ 2.62
CFTRP13569 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
CFTRP13569 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC31.44■■■□□ 2.62
CFTRP13569 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CFTRP13569 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CFTRP13569 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC31.44■■■□□ 2.62
CFTRP13569 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
CFTRP13569 AC211486.1-202ENST00000416371 468 ntBASIC31.44■■■□□ 2.62
CFTRP13569 AC023274.1-201ENST00000418278 595 ntBASIC31.44■■■□□ 2.62
CFTRP13569 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
CFTRP13569 AC211476.1-201ENST00000503899 468 ntBASIC31.44■■■□□ 2.62
CFTRP13569 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC31.44■■■□□ 2.62
CFTRP13569 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC31.44■■■□□ 2.62
CFTRP13569 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
CFTRP13569 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms