Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
THRAP10827 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
THRAP10827 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
THRAP10827 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
THRAP10827 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.52■□□□□ 0.55
THRAP10827 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
THRAP10827 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
THRAP10827 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
THRAP10827 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.51■□□□□ 0.55
THRAP10827 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.51■□□□□ 0.55
THRAP10827 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.51■□□□□ 0.55
THRAP10827 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.51■□□□□ 0.55
THRAP10827 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.51■□□□□ 0.55
THRAP10827 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
THRAP10827 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
THRAP10827 AL023803.3-201ENST00000615559 522 ntBASIC18.51■□□□□ 0.55
THRAP10827 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 AL138966.2-201ENST00000621997 464 ntBASIC18.51■□□□□ 0.55
THRAP10827 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.51■□□□□ 0.55
THRAP10827 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
THRAP10827 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
THRAP10827 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.51■□□□□ 0.55
THRAP10827 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
THRAP10827 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
THRAP10827 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.5■□□□□ 0.55
THRAP10827 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
THRAP10827 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THRAP10827 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.5■□□□□ 0.55
THRAP10827 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
THRAP10827 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.5■□□□□ 0.55
THRAP10827 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
THRAP10827 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THRAP10827 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THRAP10827 KRT8P41-201ENST00000533985 1514 ntBASIC18.5■□□□□ 0.55
THRAP10827 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.5■□□□□ 0.55
THRAP10827 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
THRAP10827 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.5■□□□□ 0.55
THRAP10827 AK4P3-201ENST00000418260 669 ntBASIC18.5■□□□□ 0.55
THRAP10827 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.5■□□□□ 0.55
THRAP10827 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
THRAP10827 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
THRAP10827 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
THRAP10827 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
THRAP10827 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.5■□□□□ 0.55
THRAP10827 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THRAP10827 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THRAP10827 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THRAP10827 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.5■□□□□ 0.55
THRAP10827 AC104417.2-201ENST00000562989 1793 ntBASIC18.5■□□□□ 0.55
THRAP10827 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THRAP10827 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THRAP10827 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
THRAP10827 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
THRAP10827 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.49■□□□□ 0.55
THRAP10827 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.49■□□□□ 0.55
THRAP10827 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
THRAP10827 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.49■□□□□ 0.55
THRAP10827 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
THRAP10827 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
THRAP10827 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
THRAP10827 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
THRAP10827 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
THRAP10827 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.49■□□□□ 0.55
THRAP10827 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.49■□□□□ 0.55
THRAP10827 ABALON-201ENST00000629058 1903 ntBASIC18.49■□□□□ 0.55
THRAP10827 SDHAP1-207ENST00000440850 2000 ntBASIC18.49■□□□□ 0.55
THRAP10827 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
THRAP10827 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
THRAP10827 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
THRAP10827 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
THRAP10827 AC117947.1-201ENST00000427448 529 ntBASIC18.49■□□□□ 0.55
THRAP10827 TSPY17P-201ENST00000450329 467 ntBASIC18.49■□□□□ 0.55
THRAP10827 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.49■□□□□ 0.55
THRAP10827 AC087388.1-201ENST00000571370 1112 ntBASIC18.49■□□□□ 0.55
THRAP10827 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms