Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 PRORSD1P-201ENST00000295112 541 ntBASIC19.96■□□□□ 0.79
CCDC172P0C7W6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 AC008556.1-201ENST00000610908 2040 ntBASIC19.96■□□□□ 0.79
CCDC172P0C7W6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC172P0C7W6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 ABHD17AP1-201ENST00000358206 933 ntBASIC19.95■□□□□ 0.78
CCDC172P0C7W6 MIR564-202ENST00000385049 94 ntBASIC19.95■□□□□ 0.78
CCDC172P0C7W6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 AC097488.1-201ENST00000507834 756 ntBASIC19.95■□□□□ 0.78
CCDC172P0C7W6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC172P0C7W6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC172P0C7W6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 AL023284.2-201ENST00000405850 579 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms