Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.81■□□□□ 0.92
HOXC6P09630 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC6P09630 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
HOXC6P09630 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HOXC6P09630 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HOXC6P09630 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.81■□□□□ 0.92
HOXC6P09630 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
HOXC6P09630 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC6P09630 SLC25A24-204ENST00000569674 2357 ntBASIC20.8■□□□□ 0.92
HOXC6P09630 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC6P09630 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC6P09630 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC6P09630 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HOXC6P09630 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HOXC6P09630 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC6P09630 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC6P09630 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HOXC6P09630 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.8■□□□□ 0.92
HOXC6P09630 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.8■□□□□ 0.92
HOXC6P09630 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.8■□□□□ 0.92
HOXC6P09630 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.8■□□□□ 0.92
HOXC6P09630 AC093909.1-201ENST00000504731 1122 ntBASIC20.8■□□□□ 0.92
HOXC6P09630 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.8■□□□□ 0.92
HOXC6P09630 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.8■□□□□ 0.92
HOXC6P09630 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.8■□□□□ 0.92
HOXC6P09630 AL355877.3-201ENST00000622820 899 ntBASIC20.8■□□□□ 0.92
HOXC6P09630 AC243591.1-201ENST00000452967 1364 ntBASIC20.8■□□□□ 0.92
HOXC6P09630 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.8■□□□□ 0.92
HOXC6P09630 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.8■□□□□ 0.92
HOXC6P09630 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC6P09630 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXC6P09630 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.8■□□□□ 0.92
HOXC6P09630 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC6P09630 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC6P09630 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
HOXC6P09630 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC6P09630 AC093484.2-201ENST00000580996 2166 ntBASIC20.79■□□□□ 0.92
HOXC6P09630 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC6P09630 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HOXC6P09630 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC6P09630 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HOXC6P09630 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.79■□□□□ 0.92
HOXC6P09630 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.79■□□□□ 0.92
HOXC6P09630 AC008687.5-201ENST00000593746 558 ntBASIC20.79■□□□□ 0.92
HOXC6P09630 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.79■□□□□ 0.92
HOXC6P09630 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC6P09630 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC6P09630 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
HOXC6P09630 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC6P09630 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.79■□□□□ 0.92
HOXC6P09630 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXC6P09630 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC6P09630 MTMR9LP-203ENST00000426597 1545 ntBASIC20.78■□□□□ 0.92
HOXC6P09630 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC6P09630 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC6P09630 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC6P09630 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXC6P09630 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC6P09630 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HOXC6P09630 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC6P09630 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC6P09630 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXC6P09630 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.78■□□□□ 0.92
HOXC6P09630 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.78■□□□□ 0.92
HOXC6P09630 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.78■□□□□ 0.92
HOXC6P09630 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXC6P09630 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC6P09630 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC6P09630 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXC6P09630 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
HOXC6P09630 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
HOXC6P09630 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC6P09630 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.77■□□□□ 0.92
HOXC6P09630 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC6P09630 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC6P09630 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC6P09630 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC6P09630 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC6P09630 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.77■□□□□ 0.92
HOXC6P09630 RCN1P2-201ENST00000398357 915 ntBASIC20.77■□□□□ 0.92
HOXC6P09630 RBM17P3-201ENST00000417687 1192 ntBASIC20.77■□□□□ 0.92
HOXC6P09630 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXC6P09630 FGFR3P6-201ENST00000457012 610 ntBASIC20.77■□□□□ 0.92
HOXC6P09630 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HOXC6P09630 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC6P09630 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.77■□□□□ 0.92
HOXC6P09630 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.77■□□□□ 0.92
HOXC6P09630 AC005336.2-201ENST00000593183 939 ntBASIC20.77■□□□□ 0.92
HOXC6P09630 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC6P09630 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXC6P09630 MIR7706-201ENST00000613747 67 ntBASIC20.77■□□□□ 0.92
HOXC6P09630 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXC6P09630 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXC6P09630 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXC6P09630 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXC6P09630 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.77■□□□□ 0.91
HOXC6P09630 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
HOXC6P09630 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.77■□□□□ 0.91
HOXC6P09630 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HOXC6P09630 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms