Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 AL163051.1-201ENST00000569214 1512 ntBASIC19.13■□□□□ 0.65
CD48P09326 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CD48P09326 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.13■□□□□ 0.65
CD48P09326 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.13■□□□□ 0.65
CD48P09326 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.13■□□□□ 0.65
CD48P09326 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.13■□□□□ 0.65
CD48P09326 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 AC005332.8-201ENST00000622750 2735 ntBASIC19.13■□□□□ 0.65
CD48P09326 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CD48P09326 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CD48P09326 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.12■□□□□ 0.65
CD48P09326 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD48P09326 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CD48P09326 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD48P09326 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD48P09326 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.12■□□□□ 0.65
CD48P09326 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.12■□□□□ 0.65
CD48P09326 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD48P09326 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD48P09326 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD48P09326 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CD48P09326 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD48P09326 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CD48P09326 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CD48P09326 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.12■□□□□ 0.65
CD48P09326 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.12■□□□□ 0.65
CD48P09326 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CD48P09326 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.12■□□□□ 0.65
CD48P09326 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CD48P09326 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CD48P09326 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.11■□□□□ 0.65
CD48P09326 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD48P09326 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD48P09326 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.11■□□□□ 0.65
CD48P09326 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD48P09326 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD48P09326 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD48P09326 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD48P09326 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CD48P09326 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD48P09326 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.11■□□□□ 0.65
CD48P09326 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CD48P09326 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.11■□□□□ 0.65
CD48P09326 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.11■□□□□ 0.65
CD48P09326 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.11■□□□□ 0.65
CD48P09326 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.11■□□□□ 0.65
CD48P09326 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.11■□□□□ 0.65
CD48P09326 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.11■□□□□ 0.65
CD48P09326 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD48P09326 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD48P09326 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.11■□□□□ 0.65
CD48P09326 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CD48P09326 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.11■□□□□ 0.65
CD48P09326 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.11■□□□□ 0.65
CD48P09326 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.11■□□□□ 0.65
CD48P09326 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CD48P09326 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.11■□□□□ 0.65
CD48P09326 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD48P09326 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD48P09326 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD48P09326 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CD48P09326 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.1■□□□□ 0.65
CD48P09326 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD48P09326 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.1■□□□□ 0.65
CD48P09326 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD48P09326 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.1■□□□□ 0.65
CD48P09326 AC128688.1-201ENST00000487626 519 ntBASIC19.1■□□□□ 0.65
CD48P09326 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.1■□□□□ 0.65
CD48P09326 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.1■□□□□ 0.65
CD48P09326 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.1■□□□□ 0.65
CD48P09326 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD48P09326 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.1■□□□□ 0.65
CD48P09326 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD48P09326 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.1■□□□□ 0.65
CD48P09326 REXO1L9P-201ENST00000604264 2108 ntBASIC19.1■□□□□ 0.65
CD48P09326 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CD48P09326 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD48P09326 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD48P09326 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.1■□□□□ 0.65
CD48P09326 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD48P09326 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.1■□□□□ 0.65
CD48P09326 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CD48P09326 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.1■□□□□ 0.65
CD48P09326 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CD48P09326 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CD48P09326 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD48P09326 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CD48P09326 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.09■□□□□ 0.65
CD48P09326 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CD48P09326 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms