Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL1A2P08123 UNC93B7-201ENST00000509439 705 ntBASIC20.19■□□□□ 0.82
COL1A2P08123 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.19■□□□□ 0.82
COL1A2P08123 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.19■□□□□ 0.82
COL1A2P08123 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.19■□□□□ 0.82
COL1A2P08123 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.19■□□□□ 0.82
COL1A2P08123 AP005901.3-202ENST00000581653 237 ntBASIC20.19■□□□□ 0.82
COL1A2P08123 AL732292.2-201ENST00000609649 430 ntBASIC20.19■□□□□ 0.82
COL1A2P08123 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.19■□□□□ 0.82
COL1A2P08123 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A2P08123 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A2P08123 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A2P08123 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COL1A2P08123 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.18■□□□□ 0.82
COL1A2P08123 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A2P08123 NSUN5P1-202ENST00000421140 1535 ntBASIC20.18■□□□□ 0.82
COL1A2P08123 NSUN5P2-203ENST00000457352 1529 ntBASIC20.18■□□□□ 0.82
COL1A2P08123 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.18■□□□□ 0.82
COL1A2P08123 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A2P08123 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.18■□□□□ 0.82
COL1A2P08123 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A2P08123 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A2P08123 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A2P08123 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COL1A2P08123 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.18■□□□□ 0.82
COL1A2P08123 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
COL1A2P08123 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.18■□□□□ 0.82
COL1A2P08123 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.18■□□□□ 0.82
COL1A2P08123 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.18■□□□□ 0.82
COL1A2P08123 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.18■□□□□ 0.82
COL1A2P08123 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.18■□□□□ 0.82
COL1A2P08123 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.18■□□□□ 0.82
COL1A2P08123 KRT18P31-201ENST00000506277 1292 ntBASIC20.18■□□□□ 0.82
COL1A2P08123 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A2P08123 AC091304.2-201ENST00000564639 760 ntBASIC20.18■□□□□ 0.82
COL1A2P08123 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.18■□□□□ 0.82
COL1A2P08123 AC099336.1-202ENST00000602961 463 ntBASIC20.18■□□□□ 0.82
COL1A2P08123 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.17■□□□□ 0.82
COL1A2P08123 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A2P08123 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.17■□□□□ 0.82
COL1A2P08123 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A2P08123 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A2P08123 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A2P08123 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A2P08123 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A2P08123 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A2P08123 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A2P08123 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
COL1A2P08123 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A2P08123 AC026396.1-201ENST00000419388 421 ntBASIC20.17■□□□□ 0.82
COL1A2P08123 TSPY12P-201ENST00000421279 868 ntBASIC20.17■□□□□ 0.82
COL1A2P08123 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.17■□□□□ 0.82
COL1A2P08123 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A2P08123 AC138894.3-201ENST00000603787 634 ntBASIC20.17■□□□□ 0.82
COL1A2P08123 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A2P08123 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A2P08123 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A2P08123 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
COL1A2P08123 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A2P08123 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
COL1A2P08123 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A2P08123 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.16■□□□□ 0.82
COL1A2P08123 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A2P08123 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A2P08123 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A2P08123 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A2P08123 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A2P08123 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A2P08123 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COL1A2P08123 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A2P08123 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A2P08123 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A2P08123 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
COL1A2P08123 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.16■□□□□ 0.82
COL1A2P08123 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.16■□□□□ 0.82
COL1A2P08123 AC091607.1-201ENST00000490318 1060 ntBASIC20.16■□□□□ 0.82
COL1A2P08123 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.16■□□□□ 0.82
COL1A2P08123 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.16■□□□□ 0.82
COL1A2P08123 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
COL1A2P08123 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.16■□□□□ 0.82
COL1A2P08123 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A2P08123 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.16■□□□□ 0.82
COL1A2P08123 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
COL1A2P08123 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.15■□□□□ 0.82
COL1A2P08123 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A2P08123 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A2P08123 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
COL1A2P08123 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A2P08123 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A2P08123 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.15■□□□□ 0.82
COL1A2P08123 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.15■□□□□ 0.82
COL1A2P08123 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.15■□□□□ 0.82
COL1A2P08123 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.15■□□□□ 0.82
COL1A2P08123 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A2P08123 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A2P08123 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
COL1A2P08123 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A2P08123 AL031598.1-201ENST00000561511 1773 ntBASIC20.15■□□□□ 0.82
COL1A2P08123 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A2P08123 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms