Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.7■□□□□ 0.9
TPM3P06753 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TPM3P06753 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM3P06753 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM3P06753 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TPM3P06753 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.7■□□□□ 0.9
TPM3P06753 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.7■□□□□ 0.9
TPM3P06753 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TPM3P06753 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.7■□□□□ 0.9
TPM3P06753 AC008687.6-201ENST00000596318 630 ntBASIC20.7■□□□□ 0.9
TPM3P06753 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM3P06753 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM3P06753 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM3P06753 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM3P06753 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM3P06753 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
TPM3P06753 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM3P06753 AC084018.2-201ENST00000613093 2607 ntBASIC20.7■□□□□ 0.9
TPM3P06753 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TPM3P06753 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM3P06753 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TPM3P06753 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.69■□□□□ 0.9
TPM3P06753 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM3P06753 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM3P06753 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM3P06753 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
TPM3P06753 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.69■□□□□ 0.9
TPM3P06753 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.69■□□□□ 0.9
TPM3P06753 RCC2P6-201ENST00000526625 1557 ntBASIC20.69■□□□□ 0.9
TPM3P06753 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM3P06753 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM3P06753 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.69■□□□□ 0.9
TPM3P06753 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.69■□□□□ 0.9
TPM3P06753 PRKY-204ENST00000533551 1019 ntBASIC20.69■□□□□ 0.9
TPM3P06753 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.69■□□□□ 0.9
TPM3P06753 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TPM3P06753 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM3P06753 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.69■□□□□ 0.9
TPM3P06753 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM3P06753 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TPM3P06753 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.69■□□□□ 0.9
TPM3P06753 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TPM3P06753 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TPM3P06753 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.69■□□□□ 0.9
TPM3P06753 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.69■□□□□ 0.9
TPM3P06753 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.69■□□□□ 0.9
TPM3P06753 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM3P06753 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.68■□□□□ 0.9
TPM3P06753 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM3P06753 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TPM3P06753 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM3P06753 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TPM3P06753 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TPM3P06753 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM3P06753 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.68■□□□□ 0.9
TPM3P06753 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM3P06753 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.68■□□□□ 0.9
TPM3P06753 AC006970.2-201ENST00000450065 779 ntBASIC20.68■□□□□ 0.9
TPM3P06753 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.68■□□□□ 0.9
TPM3P06753 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM3P06753 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.68■□□□□ 0.9
TPM3P06753 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.68■□□□□ 0.9
TPM3P06753 SOX15-203ENST00000570788 1093 ntBASIC20.68■□□□□ 0.9
TPM3P06753 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.68■□□□□ 0.9
TPM3P06753 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.68■□□□□ 0.9
TPM3P06753 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.68■□□□□ 0.9
TPM3P06753 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TPM3P06753 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TPM3P06753 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TPM3P06753 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM3P06753 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TPM3P06753 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM3P06753 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TPM3P06753 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TPM3P06753 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM3P06753 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM3P06753 FLJ13224-201ENST00000313737 1514 ntBASIC20.68■□□□□ 0.9
TPM3P06753 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TPM3P06753 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TPM3P06753 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TPM3P06753 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TPM3P06753 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.67■□□□□ 0.9
TPM3P06753 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
TPM3P06753 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM3P06753 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.67■□□□□ 0.9
TPM3P06753 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.67■□□□□ 0.9
TPM3P06753 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM3P06753 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
TPM3P06753 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM3P06753 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM3P06753 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM3P06753 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM3P06753 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.67■□□□□ 0.9
TPM3P06753 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TPM3P06753 CROCCP5-201ENST00000436658 830 ntBASIC20.67■□□□□ 0.9
TPM3P06753 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.67■□□□□ 0.9
TPM3P06753 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.67■□□□□ 0.9
TPM3P06753 HLA-A-209ENST00000638375 975 ntBASIC20.67■□□□□ 0.9
TPM3P06753 MYC-209ENST00000641252 345 ntBASIC20.67■□□□□ 0.9
TPM3P06753 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms