Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC24.22■■□□□ 1.47
COL5A2P05997 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL5A2P05997 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
COL5A2P05997 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
COL5A2P05997 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
COL5A2P05997 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL5A2P05997 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC24.21■■□□□ 1.47
COL5A2P05997 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
COL5A2P05997 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL5A2P05997 HS6ST1P1-201ENST00000481504 1234 ntBASIC24.21■■□□□ 1.47
COL5A2P05997 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC24.21■■□□□ 1.47
COL5A2P05997 AC027796.2-201ENST00000575326 344 ntBASIC24.21■■□□□ 1.47
COL5A2P05997 CYGB-205ENST00000590175 830 ntTSL 3 BASIC24.21■■□□□ 1.47
COL5A2P05997 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL5A2P05997 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
COL5A2P05997 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL5A2P05997 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC24.21■■□□□ 1.47
COL5A2P05997 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
COL5A2P05997 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
COL5A2P05997 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
COL5A2P05997 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
COL5A2P05997 DHDH-204ENST00000523250 634 ntTSL 5 BASIC24.2■■□□□ 1.47
COL5A2P05997 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC24.2■■□□□ 1.47
COL5A2P05997 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC24.2■■□□□ 1.47
COL5A2P05997 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC24.2■■□□□ 1.47
COL5A2P05997 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
COL5A2P05997 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL5A2P05997 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
COL5A2P05997 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
COL5A2P05997 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL5A2P05997 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC24.2■■□□□ 1.46
COL5A2P05997 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL5A2P05997 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC24.2■■□□□ 1.46
COL5A2P05997 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL5A2P05997 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
COL5A2P05997 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC24.19■■□□□ 1.46
COL5A2P05997 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC24.19■■□□□ 1.46
COL5A2P05997 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC24.19■■□□□ 1.46
COL5A2P05997 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
COL5A2P05997 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL5A2P05997 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
COL5A2P05997 POLI-202ENST00000406285 2030 ntTSL 2 BASIC24.19■■□□□ 1.46
COL5A2P05997 SDHAP2-201ENST00000455183 2001 ntBASIC24.19■■□□□ 1.46
COL5A2P05997 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL5A2P05997 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL5A2P05997 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
COL5A2P05997 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL5A2P05997 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL5A2P05997 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
COL5A2P05997 AP002414.3-201ENST00000589352 1468 ntBASIC24.19■■□□□ 1.46
COL5A2P05997 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC24.19■■□□□ 1.46
COL5A2P05997 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
COL5A2P05997 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL5A2P05997 CENPM-204ENST00000402420 688 ntTSL 5 BASIC24.19■■□□□ 1.46
COL5A2P05997 KIRREL3-AS3-201ENST00000404882 831 ntBASIC24.19■■□□□ 1.46
COL5A2P05997 AC004832.2-201ENST00000426397 482 ntBASIC24.19■■□□□ 1.46
COL5A2P05997 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL5A2P05997 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC24.19■■□□□ 1.46
COL5A2P05997 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC24.19■■□□□ 1.46
COL5A2P05997 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL5A2P05997 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.18■■□□□ 1.46
COL5A2P05997 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL5A2P05997 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL5A2P05997 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL5A2P05997 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL5A2P05997 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC24.18■■□□□ 1.46
COL5A2P05997 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC24.18■■□□□ 1.46
COL5A2P05997 DNAJB3-201ENST00000446806 729 ntBASIC24.18■■□□□ 1.46
COL5A2P05997 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC24.18■■□□□ 1.46
COL5A2P05997 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC24.18■■□□□ 1.46
COL5A2P05997 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC24.18■■□□□ 1.46
COL5A2P05997 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
COL5A2P05997 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC24.18■■□□□ 1.46
COL5A2P05997 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC24.18■■□□□ 1.46
COL5A2P05997 AC107918.4-202ENST00000641623 219 ntBASIC24.18■■□□□ 1.46
COL5A2P05997 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL5A2P05997 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.18■■□□□ 1.46
COL5A2P05997 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
COL5A2P05997 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL5A2P05997 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC24.17■■□□□ 1.46
COL5A2P05997 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC24.17■■□□□ 1.46
COL5A2P05997 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
COL5A2P05997 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC24.17■■□□□ 1.46
COL5A2P05997 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL5A2P05997 AC022898.2-201ENST00000616822 1312 ntBASIC24.17■■□□□ 1.46
COL5A2P05997 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
COL5A2P05997 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL5A2P05997 HNRNPA1P28-201ENST00000424481 961 ntBASIC24.17■■□□□ 1.46
COL5A2P05997 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC24.17■■□□□ 1.46
COL5A2P05997 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
COL5A2P05997 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC24.17■■□□□ 1.46
COL5A2P05997 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
COL5A2P05997 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms