Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.47■□□□□ 0.87
LGR5O75473 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGR5O75473 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LGR5O75473 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LGR5O75473 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LGR5O75473 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.46■□□□□ 0.87
LGR5O75473 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGR5O75473 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGR5O75473 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGR5O75473 SDHAP2-201ENST00000455183 2001 ntBASIC20.46■□□□□ 0.87
LGR5O75473 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGR5O75473 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.46■□□□□ 0.87
LGR5O75473 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.46■□□□□ 0.87
LGR5O75473 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.46■□□□□ 0.87
LGR5O75473 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGR5O75473 AP000347.1-202ENST00000435868 847 ntBASIC20.46■□□□□ 0.87
LGR5O75473 LINC00265-3P-201ENST00000447588 903 ntBASIC20.46■□□□□ 0.87
LGR5O75473 TOB2P1-201ENST00000469761 992 ntBASIC20.46■□□□□ 0.87
LGR5O75473 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LGR5O75473 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.46■□□□□ 0.87
LGR5O75473 IGHV3-41-201ENST00000613121 348 ntBASIC20.46■□□□□ 0.87
LGR5O75473 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.46■□□□□ 0.87
LGR5O75473 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
LGR5O75473 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGR5O75473 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LGR5O75473 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LGR5O75473 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
LGR5O75473 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LGR5O75473 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LGR5O75473 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LGR5O75473 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.45■□□□□ 0.86
LGR5O75473 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 AP000867.3-201ENST00000524675 377 ntBASIC20.45■□□□□ 0.86
LGR5O75473 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.45■□□□□ 0.86
LGR5O75473 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.45■□□□□ 0.86
LGR5O75473 AL732292.2-201ENST00000609649 430 ntBASIC20.45■□□□□ 0.86
LGR5O75473 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LGR5O75473 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.45■□□□□ 0.86
LGR5O75473 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.45■□□□□ 0.86
LGR5O75473 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.45■□□□□ 0.86
LGR5O75473 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LGR5O75473 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.44■□□□□ 0.86
LGR5O75473 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LGR5O75473 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LGR5O75473 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.44■□□□□ 0.86
LGR5O75473 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.44■□□□□ 0.86
LGR5O75473 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LGR5O75473 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LGR5O75473 AL499627.1-201ENST00000569373 2188 ntBASIC20.44■□□□□ 0.86
LGR5O75473 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
LGR5O75473 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LGR5O75473 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.44■□□□□ 0.86
LGR5O75473 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LGR5O75473 EMBP1-201ENST00000458200 901 ntBASIC20.44■□□□□ 0.86
LGR5O75473 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LGR5O75473 AC012615.1-201ENST00000565797 1299 ntBASIC20.44■□□□□ 0.86
LGR5O75473 AL121772.3-201ENST00000610840 674 ntBASIC20.44■□□□□ 0.86
LGR5O75473 AL592071.1-201ENST00000611956 408 ntBASIC20.44■□□□□ 0.86
LGR5O75473 AC004263.2-201ENST00000617183 678 ntBASIC20.44■□□□□ 0.86
LGR5O75473 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.44■□□□□ 0.86
LGR5O75473 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LGR5O75473 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
LGR5O75473 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.43■□□□□ 0.86
LGR5O75473 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
LGR5O75473 AC113404.2-201ENST00000507884 177 ntBASIC20.43■□□□□ 0.86
LGR5O75473 GUSBP12-201ENST00000513727 720 ntBASIC20.43■□□□□ 0.86
LGR5O75473 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.43■□□□□ 0.86
LGR5O75473 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.43■□□□□ 0.86
LGR5O75473 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.43■□□□□ 0.86
LGR5O75473 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.43■□□□□ 0.86
LGR5O75473 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.43■□□□□ 0.86
LGR5O75473 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.43■□□□□ 0.86
LGR5O75473 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.43■□□□□ 0.86
LGR5O75473 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.43■□□□□ 0.86
LGR5O75473 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LGR5O75473 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.43■□□□□ 0.86
LGR5O75473 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LGR5O75473 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LGR5O75473 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LGR5O75473 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LGR5O75473 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.42■□□□□ 0.86
LGR5O75473 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LGR5O75473 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
LGR5O75473 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LGR5O75473 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms