Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 KRT18P27-201ENST00000427733 1299 ntBASIC17.86■□□□□ 0.45
GFRA3O60609 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.86■□□□□ 0.45
GFRA3O60609 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.86■□□□□ 0.45
GFRA3O60609 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.86■□□□□ 0.45
GFRA3O60609 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.86■□□□□ 0.45
GFRA3O60609 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.86■□□□□ 0.45
GFRA3O60609 AC093520.2-201ENST00000561830 333 ntBASIC17.86■□□□□ 0.45
GFRA3O60609 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.86■□□□□ 0.45
GFRA3O60609 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.86■□□□□ 0.45
GFRA3O60609 AL138831.2-201ENST00000606564 490 ntBASIC17.86■□□□□ 0.45
GFRA3O60609 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.86■□□□□ 0.45
GFRA3O60609 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
GFRA3O60609 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.86■□□□□ 0.45
GFRA3O60609 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.86■□□□□ 0.45
GFRA3O60609 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
GFRA3O60609 AP005212.1-201ENST00000581547 1997 ntBASIC17.86■□□□□ 0.45
GFRA3O60609 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.86■□□□□ 0.45
GFRA3O60609 AC006333.2-201ENST00000607957 2099 ntBASIC17.86■□□□□ 0.45
GFRA3O60609 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.86■□□□□ 0.45
GFRA3O60609 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GFRA3O60609 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFRA3O60609 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFRA3O60609 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFRA3O60609 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFRA3O60609 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GFRA3O60609 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFRA3O60609 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.85■□□□□ 0.45
GFRA3O60609 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
GFRA3O60609 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
GFRA3O60609 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
GFRA3O60609 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.85■□□□□ 0.45
GFRA3O60609 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GFRA3O60609 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GFRA3O60609 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
GFRA3O60609 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFRA3O60609 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GFRA3O60609 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFRA3O60609 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.85■□□□□ 0.45
GFRA3O60609 AC136632.2-201ENST00000512891 861 ntBASIC17.85■□□□□ 0.45
GFRA3O60609 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.85■□□□□ 0.45
GFRA3O60609 AL390955.2-201ENST00000603032 514 ntBASIC17.85■□□□□ 0.45
GFRA3O60609 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GFRA3O60609 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GFRA3O60609 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFRA3O60609 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
GFRA3O60609 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.85■□□□□ 0.45
GFRA3O60609 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.84■□□□□ 0.45
GFRA3O60609 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFRA3O60609 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFRA3O60609 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GFRA3O60609 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
GFRA3O60609 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GFRA3O60609 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.84■□□□□ 0.45
GFRA3O60609 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GFRA3O60609 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.84■□□□□ 0.45
GFRA3O60609 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.84■□□□□ 0.45
GFRA3O60609 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GFRA3O60609 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFRA3O60609 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.84■□□□□ 0.45
GFRA3O60609 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GFRA3O60609 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GFRA3O60609 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.84■□□□□ 0.45
GFRA3O60609 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
GFRA3O60609 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GFRA3O60609 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFRA3O60609 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
GFRA3O60609 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.84■□□□□ 0.45
GFRA3O60609 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GFRA3O60609 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFRA3O60609 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.84■□□□□ 0.45
GFRA3O60609 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.84■□□□□ 0.45
GFRA3O60609 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GFRA3O60609 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GFRA3O60609 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.83■□□□□ 0.45
GFRA3O60609 AC006128.1-201ENST00000624704 1661 ntBASIC17.83■□□□□ 0.45
GFRA3O60609 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GFRA3O60609 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.83■□□□□ 0.45
GFRA3O60609 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GFRA3O60609 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GFRA3O60609 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.83■□□□□ 0.44
GFRA3O60609 AL512353.2-201ENST00000448759 1962 ntBASIC17.83■□□□□ 0.44
GFRA3O60609 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GFRA3O60609 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.83■□□□□ 0.44
GFRA3O60609 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
GFRA3O60609 ELK2BP-201ENST00000415014 1224 ntBASIC17.83■□□□□ 0.44
GFRA3O60609 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.83■□□□□ 0.44
GFRA3O60609 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.83■□□□□ 0.44
GFRA3O60609 ACTG1P14-201ENST00000446382 1122 ntBASIC17.83■□□□□ 0.44
GFRA3O60609 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.83■□□□□ 0.44
GFRA3O60609 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.83■□□□□ 0.44
GFRA3O60609 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms