Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 UBALD1-205ENST00000590891 2641 ntBASIC18.18■□□□□ 0.5
SNX3O60493 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX3O60493 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.18■□□□□ 0.5
SNX3O60493 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SNX3O60493 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.18■□□□□ 0.5
SNX3O60493 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.18■□□□□ 0.5
SNX3O60493 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX3O60493 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SNX3O60493 NTF6G-201ENST00000591094 616 ntBASIC18.18■□□□□ 0.5
SNX3O60493 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.18■□□□□ 0.5
SNX3O60493 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SNX3O60493 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX3O60493 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX3O60493 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
SNX3O60493 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX3O60493 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SNX3O60493 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX3O60493 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 PHGDH-209ENST00000641074 1780 ntBASIC18.17■□□□□ 0.5
SNX3O60493 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SNX3O60493 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.17■□□□□ 0.5
SNX3O60493 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX3O60493 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX3O60493 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX3O60493 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX3O60493 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.17■□□□□ 0.5
SNX3O60493 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SNX3O60493 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SNX3O60493 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
SNX3O60493 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SNX3O60493 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
SNX3O60493 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SNX3O60493 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX3O60493 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX3O60493 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SNX3O60493 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX3O60493 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX3O60493 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX3O60493 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX3O60493 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SNX3O60493 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX3O60493 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX3O60493 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX3O60493 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX3O60493 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SNX3O60493 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX3O60493 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.16■□□□□ 0.5
SNX3O60493 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
SNX3O60493 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.16■□□□□ 0.5
SNX3O60493 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX3O60493 AC011767.1-201ENST00000617410 1153 ntBASIC18.16■□□□□ 0.5
SNX3O60493 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX3O60493 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SNX3O60493 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX3O60493 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX3O60493 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
SNX3O60493 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX3O60493 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX3O60493 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX3O60493 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX3O60493 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX3O60493 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX3O60493 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX3O60493 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX3O60493 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SNX3O60493 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX3O60493 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SNX3O60493 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
SNX3O60493 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX3O60493 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX3O60493 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX3O60493 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX3O60493 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX3O60493 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SNX3O60493 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX3O60493 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX3O60493 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX3O60493 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX3O60493 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX3O60493 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX3O60493 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX3O60493 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX3O60493 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX3O60493 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms