Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA12O60330 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA12O60330 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDHGA12O60330 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA12O60330 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA12O60330 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.28■□□□□ 0.52
PCDHGA12O60330 AC091304.2-201ENST00000564639 760 ntBASIC18.28■□□□□ 0.52
PCDHGA12O60330 RNF126P1-202ENST00000569893 925 ntBASIC18.28■□□□□ 0.52
PCDHGA12O60330 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGA12O60330 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA12O60330 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA12O60330 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA12O60330 AL109659.2-201ENST00000606809 1674 ntBASIC18.28■□□□□ 0.52
PCDHGA12O60330 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHGA12O60330 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA12O60330 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA12O60330 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PCDHGA12O60330 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA12O60330 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGA12O60330 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGA12O60330 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA12O60330 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PCDHGA12O60330 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA12O60330 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGA12O60330 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDHGA12O60330 LINC00265-3P-201ENST00000447588 903 ntBASIC18.27■□□□□ 0.52
PCDHGA12O60330 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHGA12O60330 EMBP1-201ENST00000458200 901 ntBASIC18.27■□□□□ 0.52
PCDHGA12O60330 AP000867.3-201ENST00000524675 377 ntBASIC18.27■□□□□ 0.52
PCDHGA12O60330 AL160237.2-201ENST00000556165 472 ntBASIC18.27■□□□□ 0.52
PCDHGA12O60330 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHGA12O60330 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGA12O60330 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA12O60330 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PCDHGA12O60330 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCDHGA12O60330 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA12O60330 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHGA12O60330 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA12O60330 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHGA12O60330 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA12O60330 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHGA12O60330 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
PCDHGA12O60330 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA12O60330 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHGA12O60330 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
PCDHGA12O60330 HOXB1-202ENST00000577092 1414 ntBASIC18.26■□□□□ 0.51
PCDHGA12O60330 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGA12O60330 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA12O60330 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA12O60330 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 AP000347.1-202ENST00000435868 847 ntBASIC18.26■□□□□ 0.51
PCDHGA12O60330 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGA12O60330 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA12O60330 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGA12O60330 AC104692.2-201ENST00000603054 253 ntBASIC18.26■□□□□ 0.51
PCDHGA12O60330 AL732292.2-201ENST00000609649 430 ntBASIC18.26■□□□□ 0.51
PCDHGA12O60330 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA12O60330 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PCDHGA12O60330 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGA12O60330 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHGA12O60330 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGA12O60330 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA12O60330 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHGA12O60330 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHGA12O60330 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PCDHGA12O60330 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHGA12O60330 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHGA12O60330 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.25■□□□□ 0.51
PCDHGA12O60330 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHGA12O60330 TOB2P1-201ENST00000469761 992 ntBASIC18.25■□□□□ 0.51
PCDHGA12O60330 AC104390.1-201ENST00000555663 520 ntBASIC18.25■□□□□ 0.51
PCDHGA12O60330 AC090616.6-201ENST00000582640 721 ntBASIC18.25■□□□□ 0.51
PCDHGA12O60330 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGA12O60330 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.25■□□□□ 0.51
PCDHGA12O60330 AL031008.1-201ENST00000619963 541 ntBASIC18.25■□□□□ 0.51
PCDHGA12O60330 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA12O60330 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms