Protein–RNA interactions for Protein: O43497

CACNA1G, Voltage-dependent T-type calcium channel subunit alpha-1G, humanhuman

Predictions only

Length 2,377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1GO43497 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1GO43497 AC009533.2-201ENST00000543664 586 ntBASIC17.14■□□□□ 0.33
CACNA1GO43497 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1GO43497 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.14■□□□□ 0.33
CACNA1GO43497 Z83851.2-201ENST00000609564 659 ntBASIC17.14■□□□□ 0.33
CACNA1GO43497 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1GO43497 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1GO43497 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CACNA1GO43497 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.14■□□□□ 0.33
CACNA1GO43497 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.14■□□□□ 0.33
CACNA1GO43497 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.14■□□□□ 0.33
CACNA1GO43497 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CACNA1GO43497 RNA5SP416-201ENST00000516838 111 ntBASIC17.14■□□□□ 0.33
CACNA1GO43497 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.14■□□□□ 0.33
CACNA1GO43497 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.14■□□□□ 0.33
CACNA1GO43497 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CACNA1GO43497 AC010240.3-201ENST00000607688 395 ntBASIC17.14■□□□□ 0.33
CACNA1GO43497 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.14■□□□□ 0.33
CACNA1GO43497 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CACNA1GO43497 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.14■□□□□ 0.33
CACNA1GO43497 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CACNA1GO43497 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
CACNA1GO43497 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 PRSS29P-201ENST00000440800 595 ntBASIC17.13■□□□□ 0.33
CACNA1GO43497 AC069262.1-201ENST00000539058 672 ntBASIC17.13■□□□□ 0.33
CACNA1GO43497 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.13■□□□□ 0.33
CACNA1GO43497 AC005336.2-201ENST00000593183 939 ntBASIC17.13■□□□□ 0.33
CACNA1GO43497 AC073592.5-201ENST00000624854 528 ntBASIC17.13■□□□□ 0.33
CACNA1GO43497 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CACNA1GO43497 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CACNA1GO43497 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CACNA1GO43497 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA1GO43497 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CACNA1GO43497 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA1GO43497 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CACNA1GO43497 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1GO43497 LINC01521-201ENST00000504184 1943 ntBASIC17.12■□□□□ 0.33
CACNA1GO43497 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA1GO43497 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1GO43497 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1GO43497 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA1GO43497 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.12■□□□□ 0.33
CACNA1GO43497 MCCD1P2-201ENST00000423228 335 ntBASIC17.12■□□□□ 0.33
CACNA1GO43497 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1GO43497 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CACNA1GO43497 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.12■□□□□ 0.33
CACNA1GO43497 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1GO43497 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA1GO43497 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA1GO43497 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.12■□□□□ 0.33
CACNA1GO43497 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CACNA1GO43497 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1GO43497 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1GO43497 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CACNA1GO43497 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1GO43497 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.11■□□□□ 0.33
CACNA1GO43497 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CACNA1GO43497 MRPL20P1-201ENST00000400819 433 ntBASIC17.11■□□□□ 0.33
CACNA1GO43497 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.11■□□□□ 0.33
CACNA1GO43497 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNA1GO43497 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.11■□□□□ 0.33
CACNA1GO43497 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.11■□□□□ 0.33
CACNA1GO43497 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1GO43497 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CACNA1GO43497 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNA1GO43497 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1GO43497 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1GO43497 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1GO43497 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNA1GO43497 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1GO43497 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1GO43497 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNA1GO43497 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.11■□□□□ 0.33
CACNA1GO43497 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1GO43497 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1GO43497 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNA1GO43497 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1GO43497 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1GO43497 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNA1GO43497 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNA1GO43497 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CACNA1GO43497 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.11■□□□□ 0.33
CACNA1GO43497 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.11■□□□□ 0.33
CACNA1GO43497 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.11■□□□□ 0.33
CACNA1GO43497 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms