Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.2□□□□□ -0.3
PAX4O43316 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.2□□□□□ -0.3
PAX4O43316 TSPY15P-201ENST00000457163 923 ntBASIC13.2□□□□□ -0.3
PAX4O43316 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PAX4O43316 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.2□□□□□ -0.3
PAX4O43316 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PAX4O43316 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.2□□□□□ -0.3
PAX4O43316 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PAX4O43316 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PAX4O43316 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.2□□□□□ -0.3
PAX4O43316 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PAX4O43316 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
PAX4O43316 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PAX4O43316 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.2□□□□□ -0.3
PAX4O43316 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PAX4O43316 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
PAX4O43316 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PAX4O43316 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PAX4O43316 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PAX4O43316 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
PAX4O43316 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PAX4O43316 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
PAX4O43316 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
PAX4O43316 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.19□□□□□ -0.3
PAX4O43316 RCC2P3-201ENST00000418112 1537 ntBASIC13.19□□□□□ -0.3
PAX4O43316 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
PAX4O43316 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
PAX4O43316 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
PAX4O43316 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
PAX4O43316 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 KRT8P32-201ENST00000512863 1461 ntBASIC13.19□□□□□ -0.3
PAX4O43316 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
PAX4O43316 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
PAX4O43316 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.19□□□□□ -0.3
PAX4O43316 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.19□□□□□ -0.3
PAX4O43316 MCCD1P1-208ENST00000445732 328 ntBASIC13.19□□□□□ -0.3
PAX4O43316 BX088651.1-201ENST00000540551 451 ntBASIC13.19□□□□□ -0.3
PAX4O43316 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
PAX4O43316 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.19□□□□□ -0.3
PAX4O43316 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PAX4O43316 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
PAX4O43316 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
PAX4O43316 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
PAX4O43316 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.18□□□□□ -0.3
PAX4O43316 HEIH-201ENST00000623091 1652 ntBASIC13.18□□□□□ -0.3
PAX4O43316 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
PAX4O43316 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
PAX4O43316 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.18□□□□□ -0.3
PAX4O43316 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.18□□□□□ -0.3
PAX4O43316 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.18□□□□□ -0.3
PAX4O43316 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.18□□□□□ -0.3
PAX4O43316 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 EGLN1P1-201ENST00000531623 762 ntBASIC13.18□□□□□ -0.3
PAX4O43316 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.18□□□□□ -0.3
PAX4O43316 AL353719.1-201ENST00000566847 864 ntBASIC13.18□□□□□ -0.3
PAX4O43316 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.18□□□□□ -0.3
PAX4O43316 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.18□□□□□ -0.3
PAX4O43316 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
PAX4O43316 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
PAX4O43316 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.18□□□□□ -0.3
PAX4O43316 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.18□□□□□ -0.3
PAX4O43316 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PAX4O43316 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PAX4O43316 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PAX4O43316 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.17□□□□□ -0.3
PAX4O43316 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PAX4O43316 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PAX4O43316 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.17□□□□□ -0.3
PAX4O43316 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms