Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
FOXN1O15353 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
FOXN1O15353 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
FOXN1O15353 AL391807.1-203ENST00000604392 2365 ntBASIC21.99■■□□□ 1.11
FOXN1O15353 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.99■■□□□ 1.11
FOXN1O15353 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
FOXN1O15353 Z83836.1-201ENST00000624605 1642 ntBASIC21.99■■□□□ 1.11
FOXN1O15353 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
FOXN1O15353 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.99■■□□□ 1.11
FOXN1O15353 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
FOXN1O15353 AC018712.1-201ENST00000455767 687 ntBASIC21.99■■□□□ 1.11
FOXN1O15353 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.99■■□□□ 1.11
FOXN1O15353 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.99■■□□□ 1.11
FOXN1O15353 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.99■■□□□ 1.11
FOXN1O15353 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.99■■□□□ 1.11
FOXN1O15353 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.99■■□□□ 1.11
FOXN1O15353 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
FOXN1O15353 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.99■■□□□ 1.11
FOXN1O15353 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
FOXN1O15353 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
FOXN1O15353 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.99■■□□□ 1.11
FOXN1O15353 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
FOXN1O15353 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
FOXN1O15353 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
FOXN1O15353 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.98■■□□□ 1.11
FOXN1O15353 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.98■■□□□ 1.11
FOXN1O15353 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXN1O15353 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXN1O15353 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXN1O15353 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
FOXN1O15353 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXN1O15353 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.98■■□□□ 1.11
FOXN1O15353 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
FOXN1O15353 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.98■■□□□ 1.11
FOXN1O15353 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.98■■□□□ 1.11
FOXN1O15353 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.98■■□□□ 1.11
FOXN1O15353 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
FOXN1O15353 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.98■■□□□ 1.11
FOXN1O15353 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.98■■□□□ 1.11
FOXN1O15353 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.98■■□□□ 1.11
FOXN1O15353 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.98■■□□□ 1.11
FOXN1O15353 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXN1O15353 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
FOXN1O15353 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXN1O15353 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXN1O15353 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXN1O15353 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXN1O15353 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
FOXN1O15353 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
FOXN1O15353 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.97■■□□□ 1.11
FOXN1O15353 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
FOXN1O15353 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.97■■□□□ 1.11
FOXN1O15353 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXN1O15353 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXN1O15353 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.97■■□□□ 1.11
FOXN1O15353 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXN1O15353 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.97■■□□□ 1.11
FOXN1O15353 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.97■■□□□ 1.11
FOXN1O15353 METTL21AP1-201ENST00000438852 635 ntBASIC21.97■■□□□ 1.11
FOXN1O15353 COX20P2-201ENST00000452636 358 ntBASIC21.97■■□□□ 1.11
FOXN1O15353 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.97■■□□□ 1.11
FOXN1O15353 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.97■■□□□ 1.11
FOXN1O15353 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXN1O15353 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.97■■□□□ 1.11
FOXN1O15353 FAM197Y3-203ENST00000618346 717 ntBASIC21.97■■□□□ 1.11
FOXN1O15353 AC116407.3-201ENST00000623905 1129 ntBASIC21.97■■□□□ 1.11
FOXN1O15353 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.97■■□□□ 1.11
FOXN1O15353 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.97■■□□□ 1.11
FOXN1O15353 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXN1O15353 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.97■■□□□ 1.11
FOXN1O15353 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXN1O15353 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
FOXN1O15353 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXN1O15353 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.96■■□□□ 1.11
FOXN1O15353 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXN1O15353 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXN1O15353 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXN1O15353 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.96■■□□□ 1.11
FOXN1O15353 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.96■■□□□ 1.11
FOXN1O15353 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
FOXN1O15353 MED15P5-201ENST00000423150 992 ntBASIC21.96■■□□□ 1.11
FOXN1O15353 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
FOXN1O15353 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.96■■□□□ 1.11
FOXN1O15353 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.96■■□□□ 1.11
FOXN1O15353 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.96■■□□□ 1.11
FOXN1O15353 AL157888.1-201ENST00000631930 593 ntBASIC21.96■■□□□ 1.11
FOXN1O15353 FAM215A-202ENST00000632077 792 ntBASIC21.96■■□□□ 1.11
FOXN1O15353 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXN1O15353 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.96■■□□□ 1.11
FOXN1O15353 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
FOXN1O15353 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXN1O15353 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.96■■□□□ 1.11
FOXN1O15353 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
FOXN1O15353 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
FOXN1O15353 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
FOXN1O15353 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.95■■□□□ 1.11
FOXN1O15353 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.95■■□□□ 1.1
FOXN1O15353 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXN1O15353 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXN1O15353 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms